Escherichia coli ABU 83972: ECABU_c08390
Help
Entry
ECABU_c08390 CDS
T01995
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eab
Escherichia coli ABU 83972
Pathway
eab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECABU_c08390 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eab03019
]
ECABU_c08390 (rhlE)
Enzymes [BR:
eab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ECABU_c08390 (rhlE)
Messenger RNA biogenesis [BR:
eab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECABU_c08390 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ADN45417
LinkDB
All DBs
Position
861804..863165
Genome browser
AA seq
453 aa
AA seq
DB search
MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK
RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI
GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGRGQGGGRGQQQPRRAESGAKSGN
AKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgattctttgggtttaagccctgatatcctgcgcgccgttgccgagcagggt
taccgtgaacccacccctattcagcagcaggcgatccctgcggtgctggaaggccgcgac
ctgatggccagcgcccagaccggtaccggcaaaacagcgggctttacgctgccgttgttg
caacacctgatcactcgccagccgcacgccaaagggcgtcgtccggtacgcgcgctcatt
cttaccccgacccgtgaactggcggcgcagattggcgaaaacgtccgtgattacagcaaa
tatctgaacattcgttcgctggtggtgtttggcggtgtcagcattaacccacaaatgatg
aagttgcgcggcggcgttgatgtgctggtggcaacgccgggacgtctgctggacctggaa
catcaaaatgcagtgaagctggatcaggttgaaatcctcgtccttgatgaagctgaccgc
atgctcgacatgggctttatccacgatatccgtcgcgtgttaacaaaactgccagcgaag
cgccagaacctgttgttctccgcgaccttctctgacgatattaaagccctggcggaaaaa
ctgttgcacaacccgctggaaatcgaagtggcacgccgcaatactgcgtctgatcaggtg
acccagcacgttcactttgtcgataagaaacgcaaacgcgaattgctgtcgcatatgatt
gggaaagggaactggcagcaggtgctggtgtttacccgtaccaaacatggcgctaaccat
ctggctgaacagcttaataaagatggcatccgtagtgcggcgatccacggtaataaatcg
caaggtgcgcgtactcgtgcgctggccgattttaaatcgggcgatattcgtgtactggtg
gcaactgacatcgctgcgcgcggcctggatatcgaagagttgccgcacgtcgtcaactat
gagttaccaaacgtaccggaagattatgttcaccgtatcgggcgtactggccgtgcggcg
gcaactggcgaagcattgtcgctggtgtgtgttgatgaacacaaactgctgcgtgatatc
gaaaaactgctgaaaaaagagatcccgcgcattgcgattccggggtatgagccggacccg
tcaatcaaagccgaaccgatccagaacggtcgccagcaacgtggcggcggtcgtggacag
ggcggtggtcgcggtcaacagcaaccacgccgtgcggaaagtggtgcgaagtctggtaac
gcgaagcccgcagaaaaaccgtctcgtcgtctcggcgatgccaaaccggcaggcgaacaa
caacgtcgccgccgtccgcgtaaacctgccgctgcgcagtaa
DBGET
integrated database retrieval system
