KEGG   Escherichia coli ABU 83972: ECABU_c16700
Entry
ECABU_c16700      CDS       T01995                                 
Symbol
ydcS
Name
(GenBank) ABC transporter
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
eab  Escherichia coli ABU 83972
Pathway
eab02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:eab00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ECABU_c16700 (ydcS)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:eab02000]
    ECABU_c16700 (ydcS)
Transporters [BR:eab02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    ECABU_c16700 (ydcS)
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_1 SBP_bac_6 Phosphonate-bd Glyco_hydro_62
Other DBs
NCBI-ProteinID: ADN46223
LinkDB
Position
1664792..1665937
AA seq 381 aa
MSKTFARSSLCALSMTIMTAHAAEPPTNLENPEGRLDIIAWPGYIERGQTDKQYDWVTQF
EKETGCAVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKA
LDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKG
RVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRDQHNLIHRYWHDTT
VQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAY
KWMNWSLTPKVQGDVAAWFGSLPVVPQGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAE
GGKFVPYSRWTQDYIAIMGGR
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgagcaagacatttgcccgcagcagcctgtgtgcgctcagcatgacaataatgaccgct
cacgccgccgaaccgcctaccaatttagagaatccggaagggcgactggatattatcgcc
tggccgggatacatcgaacgcggacaaactgataaacagtacgactgggtaacgcaattc
gaaaaagagacaggctgcgcggtgaatgttaaaaccgccgcgacttccgatgaaatggtc
agtctgatggccaaagggggttacgatctggttacggcatccggcgatgcctcgctgcgt
ttgattatgggcaaacgcgtgcagccgattaataccgccttgattcccaactggaaagcg
ctcgatccgcgcgtggttaaaggcgactggtttaacgttggcggcaaagtttacggcaca
ccttaccaatgggggccgaacctgctgatgtacaacactaaaaccttcccgacgccgccg
gatagctggcaagtggtttttgttgagcagaatctgccggacggcaagagcaataaaggc
cgggtacaggcttatgatggccctatctacattgcggatgccgcgttgttcgtcaaagcc
acgcagccacagttgggcatcagtgatccgtatcaactcaccgaagaacagtatcaggcg
gtgctgaaagtgctgcgcgatcaacataatttgatccatcgctactggcatgacactacc
gtgcaaatgagcgatttcaaaaacgagggtgtggttgcttccagtgcatggccctatcag
gccaacgccctgaaagccgaaggccagcctgtcgctaccgttttcccgaaggagggcgtt
accggttgggctgacaccaccatgctacatagcgaagcgaaacatccggtttgcgcctac
aaatggatgaactggtcattaaccccaaaagtgcagggcgatgtggcggcctggtttggc
tcgctaccagtagtgccgcaagggtgtaaagccagtccgttattaggcgagaaaggttgt
gaaacaaacggttttaactatttcgataaaatcgccttctggaaaacgcctatagcagaa
gggggcaagtttgttccctacagtcgctggacgcaggattacattgccattatgggcggt
cgctaa

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