Escherichia coli ABU 83972: ECABU_c16800
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Entry
ECABU_c16800 CDS
T01995
Symbol
yncD
Name
(GenBank) probable tonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
eab
Escherichia coli ABU 83972
Brite
KEGG Orthology (KO) [BR:
eab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eab02000
]
ECABU_c16800 (yncD)
Transporters [BR:
eab02000
]
Other transporters
Pores ion channels [TC:
1
]
ECABU_c16800 (yncD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ADN46233
LinkDB
All DBs
Position
complement(1672465..1674567)
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AA seq
700 aa
AA seq
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MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTPAAVSVVNGEEMRLATP
RINLSESLTGVPSLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVDGIPATMPDGQG
QTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYG
LKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDDASKLSLIFN
SVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIKQTQAGLRYERSLSAQDDMSVMMY
AGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSRWTHRGELGVPLTFTTGLNYEN
MSENRKGYNNFRLNSGVPEYGQKGELRRDERNLMWNVDPYLQTQWQLSEKLSLDAGVRYS
SVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELS
YRADGQSGMNFGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRTTYK
NAGKTRRQGAELAWDQRFAGDFRVKASWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFA
SIGYIPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNFTVDLFGRVD
NLFDKEYVGSVIVNESNGRYYEPAPGRNYGVGINIAWRFE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttttccgtccgacagaccgttttgcccgcactgcttgtcctttcccccgtt
gtttttgccgctgatgaacagaccatgattgtcagtgccgcaccgcaggtggtttcagaa
ctggataccccagcagccgtgagcgtggtgaatggcgaggagatgcgcctggcaacaccg
cgcattaacttgtctgaatcactgaccggagtgcctagtttacaggtacaaaaccggcag
aactatgcgcaagatttacagctgtcgattcgcggatttggctcccgctccacttacgga
attcgcggtattcgcctgtatgtggacggtattcccgctaccatgcccgacggacaaggg
caaacatctaacatcgatttaagcagtgtgcaaaatgtggaagtgctgcgtggccccttc
tctgctctgtatggcaacgcgtctggcggtgtaatgaatgtcaccacccagaccggacaa
cagccaccaaccattgaagccagtagttactacggcagttttggcagctggcgctatggg
ctgaaagctacgggcgcaacgggcgacggcacacaacccggcgatgtcgattacaccgtc
tcaaccacacgttttacgacccacggctatcgtgaccatagcggcgcacagaaaaattta
gccaatgccaaactgggcgtacgcattgatgacgccagcaaattaagcctgattttcaat
agtgtggatatcaaagcagatgacccaggtgggctaaccaaagcagaatggaaggcgaat
ccacaacaagcgcctcgtgcagaacagtacgacacgcgaaaaaccatcaagcaaactcag
gctgggttgcgctatgagcgtagcctgagcgcgcaagatgatatgagtgtgatgatgtat
gccggagagcgagaaacgacccagtaccagtcaatcccgatggctccccaacttaacccg
tcacatgcgggcggcgtgattactctgcaacgccattatcaggggatagacagccgctgg
acacaccgtggtgaactgggcgttccgctcacgttcactaccggcctgaactacgaaaac
atgagtgaaaaccgcaagggctacaataacttccgcctgaatagcggcgtgccggaatac
gggcaaaaaggtgagttgcgccgcgacgaacgcaatctgatgtggaacgtcgatccctat
ttacagacgcagtggcagctgagcgaaaaactgtcgctggatgctggcgtgcgctacagc
tccgtgtggtttgattccaacgaccattacgttactccgggtaacggcgatgacagcggt
gatgccagttatcacaaatggctacctgccggttcgttaaaatatgcaatgaccgatgcc
tggaatatctatctggcagccgggcgaggttttgaaacgccgacgattaatgagctgtct
tatcgtgctgatggacaaagcggtatgaactttgggttaaaaccctccaccaacgataca
attgagatcggcagtaaaacgcgtattggtgatgggctgcttagtctcgcattgttccag
accgacaccgatgatgaaattgttgtcgatagcagtagcggtgggcgtacgacttacaaa
aatgccggaaagacccgtcgtcaaggcgctgaactggcatgggatcaacgtttcgcggga
gattttcgcgtaaaagcgtcctggacctggcttgatgcgacctatcgcagcaatgtgtgc
aatgaacaggattgtaacggtaaccggatgccagggatcgcccgtaatatgggctttgcg
tcgataggttatataccggaagatggttggtatgcaggcacggaagcgcgttatatgggc
gatattatggcagatgatgaaaatacggccaaagcgccttcttatacactcgtcggctta
ttcaccgggtataaatacaattaccacaattttaccgtggatttatttggtcgtgtcgat
aatttattcgataaagaatacgttggctctgtcattgtcaatgagtcaaacgggcgatat
tacgaacctgcgcccggacgaaattatggtgtcggcataaatattgcgtggcgatttgag
taa
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