Escherichia coli ABU 83972: ECABU_c24030
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Entry
ECABU_c24030 CDS
T01995
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
eab
Escherichia coli ABU 83972
Pathway
eab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECABU_c24030 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eab03400
]
ECABU_c24030 (alkA)
Enzymes [BR:
eab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ECABU_c24030 (alkA)
DNA repair and recombination proteins [BR:
eab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ECABU_c24030 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ADN46917
LinkDB
All DBs
Position
complement(2410788..2411651)
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AA seq
287 aa
AA seq
DB search
MYTLNWQPPYDWSWMLGFLAARAVSGVETVADDFYARSLAVGEYRGVVTAIPDIASHTLH
INLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGKLGAARPGLRLPGSVDAFEQGVRA
ILGQLVSVAMAAKLTARVAQLYGERLDDFPDYVCFPTPQRLAAADPQALKALGMPLKRAE
ALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDGTDELEA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctgaactggcagccgccgtatgactggtcgtggatgttgggttttctcgcc
gctcgtgcggtgagcggtgtggaaacggttgcggacgatttttatgcccgtagtctggcg
gtgggcgaatatcgcggcgtggtgactgctattccggatatagccagccatactctgcac
ataaatttaagtgcaggtttagaacctgttgccgctgagtgtctggcgaaaatgagccgc
ctgtttgatctgcaatgtaacccgcagattgttaacggtgcgttgggcaagttaggcgcg
gcgcggcccggattgcgtttacccggcagtgttgatgcttttgagcagggcgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgaccgccagagtggcacag
ctttatggcgaacggctggatgattttccggattatgtctgcttccccacgcctcagcgg
ctggctgcagccgacccgcaggcattaaaagcgttaggtatgccgttgaaacgggcagag
gcactgattcatctggcaaatgcggcgctggagggcaccttaccaatgacaataccgggc
gacgtagaacaagcgatgaaaacgctgcaaacttttccgggtatcgggcgctggacggcg
aattatttcgccttacgtggctggcaggcgaaagatgttttcctgccggatgattatctg
attaaacagcgatttccgggaatgacaccggcacaaatccgccgttatgccgaacgctgg
aagccctggcgttcttatgcgctgttgcatatctggtatacggaaggctggcaaccagac
ggaacggacgaattggaggcctga
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