Escherichia coli ABU 83972: ECABU_c28110
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Entry
ECABU_c28110 CDS
T01995
Symbol
xseA
Name
(GenBank) exonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
eab
Escherichia coli ABU 83972
Pathway
eab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ECABU_c28110 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eab03400
]
ECABU_c28110 (xseA)
Enzymes [BR:
eab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ECABU_c28110 (xseA)
DNA repair and recombination proteins [BR:
eab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ECABU_c28110 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
OMPdecase
Motif
Other DBs
NCBI-ProteinID:
ADN47304
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All DBs
Position
2861837..2863213
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AA seq
458 aa
AA seq
DB search
MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRC
AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAK
LQAEGLFELQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYSTAVQGDD
APGQIVRAIELANKRNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIH
HRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQSRIHRA
QTRIQQLEYRLAETLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQV
KQVKVGETLTTRLGDGVVISEVSAVTKTRKSRKKTSNP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttaccttctcaatcccctgcaatttttaccgttagccgcctgaatcaaacggttcgt
ctgctgcttgagcatgagatggggcaggtgtggatcagcggcgaaatctctaattttaca
caaccagcctccggtcactggtactttacgcttaaagacgataccgcgcaggtgcgctgt
gcgatgttccgcaacagcaaccgccgggtcaccttccgcccacagcacgggcaacaggtt
ttagttcgcgccaatattacactctacgagccgcgcggcgattatcaaattatcgtcgaa
agtatgcagccggccggtgaaggattgctgcaacagaagtacgaacagcttaaagcgaag
ttgcaggctgaaggtttgttcgagctgcaatacaaaaaatcactcccctcccctgcgcat
tgcgttggtgtgatcacctcaaaaaccggtgctgcgctacatgatattttgcatgtgtta
aaacgtcgcgatccttctctgccggtgatcatctactccaccgccgtacagggggatgat
gcgccggggcaaatcgttcgtgccattgaactggcgaataagcgcaacgagtgtgacgtg
ttgatcgttggccgtggcggtggttcgctggaagatttatggagttttaatgatgagcgt
gtggcgcgggcgatttttgccagtcgcattccgatagtcagcgccgtcgggcatgaaacc
gatgtgacaattgctgactttgttgctgatctacgtgcgccaacgccgtcagccgccgct
gaagtggtgagccgtaatcagcaagaattgctacgtcaggtgcaatcgacccgtcaacgg
ctggagatggcgatggactattatctcgccaatcgcacgcggcgctttacgcagatccat
caccgattacagcaacagcatccgcagctccggctggcacgccagcaaactatgctcgaa
cgtctgcaaaagcggatgagctttgcgctggagaatcagcttaaacgcgcgggtcagcaa
cagcagcgattaacacggcaactcgtccagcaaaatccgcagtcgcgtattcatcgcgcg
caaacgcgcattcagcaactggaatatcgtttagcagaaaccctgcgcgcacagcttagc
gccacgcgtgaacgtttcggtaatgcagtaacacacctcgaagccgtaagcccactgtca
acgctggcgcgcggttatagcgtcaccagcgccgctgatggcgcggtgttaaaacaggtt
aagcaagtgaaagtgggtgagacactgaccacacgactgggagatggtgtggtgattagt
gaagtcagcgccgtaacaaaaacccgcaaatcacgtaaaaaaacgtctaatccgtag
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