Escherichia coli ABU 83972: ECABU_c28600
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Entry
ECABU_c28600 CDS
T01995
Symbol
yfhD
Name
(GenBank) putative transglycosylase
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
eab
Escherichia coli ABU 83972
Brite
KEGG Orthology (KO) [BR:
eab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eab01011
]
ECABU_c28600 (yfhD)
Enzymes [BR:
eab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ECABU_c28600 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
eab01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ECABU_c28600 (yfhD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
ADN47352
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Position
2929307..2930863
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AA seq
518 aa
AA seq
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MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGELRVSTIHTPLTYNEIN
GKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQ
PGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKDTKFPELSWKVD
DKKGSVELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDEQPVTWFSPLDGDNT
LSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDAVLPQLKPLFEKYAE
EIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDRTDAEQSISGGVRYL
QDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTTKTKGNPDSWADVKQRLPLLSQ
KPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAAMQLAQDYPAVSPTE
LGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaattaaagattaattatctgttcatcggcattctggcactgctgctcgcggtc
gctctctggccatccattccctggtttggtaaagccgacaaccgtatcgccgccattcaa
gcgcggggagagttgcgtgtgagcaccattcatacccccctgacttataacgaaatcaac
gggaaaccttttggcctggattacgaactggcgaaacagtttgccgattacctcggcgta
aaactgaaagtgaccgtgcggcagaatatcagccagctgtttgacgacctcgataatggt
aacgccgacctgctggcggcaggcctggtctataacagtgagcgggtaaaaaattatcag
cctggccctacctattattccgtgtcacaacaactggtttataaagtcggtcagtatcgc
ccacgtacgctgggcaacctgacggcggagcaactcaccgttgcaccgggtcacgtggtg
gttaacgatctccagaccctgaaagacacaaaattcccggaattaagctggaaggtagac
gacaaaaaaggctctgtggaattaatggaagatgtcatcgaaggaaaactcgattacacc
attgctgattctgtcgccatcagcctgtttcagcgcgttcacccggaactcgccgtagcg
ctcgatatcaccgatgaacaaccggtgacctggtttagcccgttagatggcgataatacc
ctttccgccgccctgctcgacttcttcaacgaaatgaatgaagacggtacactggcacgc
attgaagagaaatacctggggcatggcgatgattttgattacgtcgatacgcgcacattt
ttacgcgccgtcgatgcggtactgccgcagttaaagcccctgtttgagaaatacgccgaa
gaaattgactggcgtttgctggccgctattgcttatcaggaatcgcactgggatgctcag
gccacttcaccgacgggtgtgcgcggcatgatgatgttaaccaaaaacaccgcgcaaagc
ctcggcattacggatcgtaccgatgccgaacagagcatcagcggcggcgtgcgttatttg
caggatatgatgagtaaagtgccggaaagtgtgccggagaacgaacggatttggtttgcc
ctcgccgcgtacaatatgggctatgcgcatatgctggatgcccgcgccctgacgacaaaa
accaaaggtaatcctgacagttgggctgacgtaaaacagcgtctgcctttacttagccag
aaaccctattacagcaagctgacttacggctacgctcgtgggcatgaagcctacgcttat
gtcgaaaatattcgtaaatatcagattagcctggtgggttatctgcaggagaaagagaag
caggctacagaagcggcgatgcaactggcgcaggattatccggcggtatcacctacggag
ttgggcaaagagaaatttccttttctctcgtttctttcccagtcgtcatcaaactatttg
acccactctccctctctgctgttttccagaaaagggagtgaagagaaacaaaattaa
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