KEGG   Escherichia coli ABU 83972: ECABU_c29230
Entry
ECABU_c29230      CDS       T01995                                 
Symbol
ygaF
Name
(GenBank) paral putative sarcosine oxidase-like protein
  KO
K15736  (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
Organism
eab  Escherichia coli ABU 83972
Pathway
eab00310  Lysine degradation
eab01100  Metabolic pathways
eab01120  Microbial metabolism in diverse environments
Module
eab_M00956  Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:eab00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    ECABU_c29230 (ygaF)
Enzymes [BR:eab01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.5  With a quinone or similar compound as acceptor
    1.1.5.13  (S)-2-hydroxyglutarate dehydrogenase
     ECABU_c29230 (ygaF)
SSDB
Motif
Pfam: DAO Pyr_redox_2 Mqo NAD_binding_9 Amino_oxidase NAD_binding_8 FAD_binding_2 Thi4
Other DBs
NCBI-ProteinID: ADN47409
LinkDB
Position
2990860..2992128
AA seq 422 aa
MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTGHNSGVIHAGVYYTPGS
LKAQFCLAGNRATKAFCDQNGIRYDNCGKMLVATSELEMERMRALWERTAANGIDREWLN
AEELREREPNITGLGGIFVPSSGIVSYREVTAAMAKIFQARGGEIIYNAEVSALSEHKNG
VVICTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHL
IYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRR
VLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDF
LFVTTPRTIHTCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAF
NQ
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactg
attgatgtttatccggatgcccgcattgcgttgctggaaaaagagtccggcccggcctgt
caccagacgggccacaacagcggcgtgatccatgctggggtctattacacgcccggcagc
ctgaaggcgcagttctgcctggcgggaaaccgcgccaccaaagccttttgcgatcaaaac
ggcattcgctatgacaactgcggcaagatgctggtcgccacctctgaactcgaaatggaa
cggatgcgcgcgttgtgggaacgcacggcggcgaacggaatcgatcgcgagtggttaaac
gccgaggaactgcgcgagcgcgaaccaaatatcaccgggctgggcggtatttttgtgccg
tccagcggcattgtcagctaccgcgaagtgacggcggcaatggcaaaaatttttcaggcc
agaggcggtgagattatctataacgccgaagtcagcgccctcagtgagcataaaaacggc
gtggtgatatgtacccgtcagggcggtgaatatgaagcatcgacgctgattagctgttcc
gggctgatggctgaccggctggtgaaaatgctcggcctcgaaccgggctttattatctgc
ccgttccgcggcgagtatttccgccttgcgccggagcataaccagattgttaaccacctg
atttaccccattcccgacccggcaatgccgtttttgggcgtgcatctcacccgcatgatc
gacggcagtgtgaccgtcgggccaaacgcggtgctggctttcaaacgcgaaggctatcgt
aagcgcgacttctcatttagcgacacgctggaaattttgggctcgtcggggattcgccgg
gtgctgcaaaaccatctacgctcaggactgggcgagatgaaaaactcgctgtgcaaaagc
ggctatctgcggctggtgcaaaagtattgtccccggctttcgttaagcgatctccagccc
tggcccgccggtgtgcgggcgcaggcggtatcgccggacggcaagctgattgacgatttt
ctgtttgtcaccaccccgcgcacgatccacacctgtaatgcgccctccccggcagcgaca
tcagcaattcctattggtgcgcatattgtcagcaaggtacaaacgctgttggcaagccag
agtaaccccggacgcacgctgcgagcggcacgtagtgtggatgccttacacgccgcattt
aatcaataa

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