Escherichia coli ABU 83972: ECABU_c31730
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Entry
ECABU_c31730 CDS
T01995
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
eab
Escherichia coli ABU 83972
Pathway
eab03410
Base excision repair
eab03430
Mismatch repair
eab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECABU_c31730 (recJ)
03430 Mismatch repair
ECABU_c31730 (recJ)
03440 Homologous recombination
ECABU_c31730 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eab03400
]
ECABU_c31730 (recJ)
DNA repair and recombination proteins [BR:
eab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ECABU_c31730 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ECABU_c31730 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ECABU_c31730 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Motif
Other DBs
NCBI-ProteinID:
ADN47643
LinkDB
All DBs
Position
complement(3253983..3255716)
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AA seq
577 aa
AA seq
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MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA
VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE
VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLR
DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPL
DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQVEALTLCEKLERSRDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GMMLKFGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSAAEMTME
VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA
LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaacttcgtcgccgagaagtcgatgaaacggccgacttgcccgct
gaattgcctcccttgctgcgccgtttatatgccagccggggtgtgcgtagcgcgcaggaa
ctggaacgcagtgttaaaggcatgctgccctggcagcaactgagcggcgtcgaaaaggcc
gttgagatcctttacaacgcttttcgcgaaggaacgcggattattgtggtcggtgatttc
gacgccgacggtgcgaccagcacggctctaagcgtgctggcgatgcgctcgcttggttgc
agcaatatcgactacctggttccaaaccgtttcgaagacggttacggcttaagcccggaa
gtagtcgatcaggctcatgcccgtggcgcgcagttaattgtcacggtggataacggtatt
tcctcccatgcgggggttgaacacgctcgttcgttgggcattccggttattgttaccgat
caccatttgccaggcgacacattacccgcagcggaagcgatcattaaccctaacttgcgc
gactgtaatttcccgtcgaaatcactggcaggcgtgggtgtggcgttttatctgatgctg
gcgctgcgcacctttttgcgcgatcagggctggtttgatgagcgcggcatcgcaattcct
aatctggcagaactgctggatctggtagcgttggggacagtggcggacgtcgtgccgctg
gacgctaataatcgcattctgacctggcaggggatgagtcgcatccgtgccggaaagtgc
cgtccggggattaaagcgctgctggaagtggccaatcgcgatccacaaaaactcgccgcc
agcgatttaggttttgcgctggggccacgtctcaatgctgccgggcgactggacgatatg
tccgttggcgtggcgctgttgttgtgtgacaacattggcgaagcgcgtgtgctggcgaat
gaactcgatgcactaaaccaaacacgtaaagagatcgaacagggaatgcaggttgaagcg
ctcactctgtgcgagaagctggaacgtagccgcgacacgctgccaggtgggctggcaatg
tatcaccctgaatggcatcagggcgttgttggcattctggcatcgcgtatcaaagagcgt
tttcaccgtccggttatcgcctttgcgcctgcgggcgacggtacgctgaaaggttccggt
cgctccattcaggggctgcatatgcgcgatgcgctggagcggctagacacgctttacccc
ggcatgatgctcaagtttggcggccatgcgatggcggcaggattgtcgctggaagaggat
aaattcgaactctttcagcaacgctttggcgaactggttaccgagtggttagatccttct
ttattgcaaggggaagtggtatcagacggcccattaagtgcggcagagatgaccatggaa
gtggcgcagctgttgcgtgatgctggcccgtgggggcagatgttcccggaaccgttgttt
gacggtcatttccgtctgttgcaacagcggctggtgggcgagcgtcatttgaaggtgatg
gtcgaaccggtcggcggcggtccactgctggacgggattgcttttaatgtcgataccgcc
ctctggccggataacggtgtgcgcgaagtgcaactggcttacaagctcgatatcaacgag
tttcgcggcaaccgcagcctgcaaattatcatcgacaatatctggccaatttag
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