Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase subunit B
|
KO |
|
Organism |
eab Escherichia coli ABU 83972
|
Brite |
KEGG Orthology (KO) [BR:eab00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:eab03032]
ECABU_c41810 (gyrB)
03400 DNA repair and recombination proteins [BR:eab03400]
ECABU_c41810 (gyrB)
Enzymes [BR:eab01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ECABU_c41810 (gyrB)
DNA replication proteins [BR:eab03032]
Prokaryotic type
DNA Topoisomerases
ECABU_c41810 (gyrB)
DNA repair and recombination proteins [BR:eab03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ECABU_c41810 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(4248280..4250694)
|
AA seq |
804 aa
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEII
VTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVT
EFEYDILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY
LLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERR
YPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLF
EPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFE
QALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI |
NT seq |
2415 nt +upstreamnt +downstreamnt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagaaattatc
gtcaccattcacgccgataactctgtctctgtacaggatgacgggcgcggcattccgacc
ggtattcacccggaagagggcgtatcggcggcggaagtgatcatgaccgttctgcacgca
ggcggtaaatttgacgataactcctataaagtgtccggcggtctgcacggcgttggtgtt
tcggtagtaaacgccctgtcgcaaaaactggagctggttatccagcgcgagggtaaaatt
caccgtcagatctacgaacacggtgtaccgcaggccccgctggcggttaccggcgagact
gaaaaaaccggcactatggtgcgtttctggccaagccttgaaaccttcaccaatgtgacc
gagttcgaatatgacattctggcgaaacgtctgcgtgagttgtcgttcctcaactccggc
gtttccattcgtctgcgcgacaagcgcgatggcaaagaagaccacttccactatgaaggc
ggcatcaaggcattcgttgaatatctgaacaagaacaaaacgccgatccacccgaatatc
ttctacttctccaccgaaaaagacggtattggcgtcgaagtggcgttgcagtggaacgat
ggcttccaggaaaacatctactgctttaccaacaacattccgcagcgtgacggcggtact
cacctggcaggcttccgtgcggcgatgacccgcaccctgaacgcctacatggacaaagaa
ggctacagcaaaaaagccaaagtcagcgccaccggtgacgatgcgcgtgaaggcctgatt
gcggtcgtttccgtgaaagtgccggacccgaaattctcctcacagaccaaagacaaactg
gtttcttctgaggtgaaatcggcggttgaacagcagatgaacgaactgctggcggaatac
ctgctggaaaacccaaccgacgcgaaaatcgtggtcggcaaaattatcgatgctgcccgt
gcccgtgaagctgcgcgtcgcgcgcgtgaaatgacccgccgtaaaggtgcgctggattta
gctggcctgccgggcaaactggcagactgccaggaacgcgatccggcgctttccgaactg
taccttgtggaaggggactccgcgggcggctctgcgaagcaggggcgtaaccgcaagaac
caggcgattctgccgctgaagggtaaaatcctcaacgtcgagaaagcgcgcttcgataag
atgctctcttctcaggaagtggcgacgcttatcaccgcgcttggttgtggtatcggtcgt
gacgagtacaacccggacaaactgcgttatcacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacattcgtacgctgctgttgaccttcttctatcgtcagatgccggaa
atcgttgaacgtggtcacgtctacatcgctcagccgccgctgtacaaagtgaagaaaggt
aagcaggaacagtacattaaagacgacgaagcgatggatcagtaccagatctctatcgcg
ctggatggcgcaacgctgcacaccaacgccagtgcaccggcgctggctggcgaagcgtta
gagaaactggtgtctgagtacaacgcgacgcagaaaatgatcaaccgcatggagcgtcgt
tatccgaaagcaatgctgaaagagcttatctatcagccgacgctgacggaagccgatctc
tctgatgagcagaccgttacccgctgggtgaacgcgctggtcagcgaactgaacgacaaa
gaacagcacggcagccagtggaagtttgatgtccataccaatgccgaacaaaacctgttc
gagccgattgttcgcgtgcgtacccacggtgtggatactgactatccgctggatcacgaa
tttatcactggcggcgaatatcgtcgtatctgcacgctgggtgagaaactgcgtggcttg
ctggaagaagatgcatttatcgaacgtggcgaacgtcgtcagccggtagccagcttcgag
caggcgctggactggctggtgaaagagtcccgtcgcggcctctccatccagcgttataaa
ggtctgggcgagatgaacccggaacagctgtgggaaaccaccatggacccggaaagccgt
cgtatgctgcgcgttaccgttaaagatgcgattgctgccgaccagttgttcactacgctt
atgggcgacgccgttgaaccgcgccgtgcgtttatcgaagagaacgccctgaaagcggcg
aatatcgatatttaa |