Escherichia coli ABU 83972: ECABU_c46990
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Entry
ECABU_c46990 CDS
T01995
Symbol
groEL
Name
(GenBank) GroEL, chaperone Hsp60
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
eab
Escherichia coli ABU 83972
Pathway
eab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECABU_c46990 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eab03019
]
ECABU_c46990 (groEL)
03110 Chaperones and folding catalysts [BR:
eab03110
]
ECABU_c46990 (groEL)
03029 Mitochondrial biogenesis [BR:
eab03029
]
ECABU_c46990 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eab04147
]
ECABU_c46990 (groEL)
Enzymes [BR:
eab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ECABU_c46990 (groEL)
Messenger RNA biogenesis [BR:
eab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ECABU_c46990 (groEL)
Chaperones and folding catalysts [BR:
eab03110
]
Heat shock proteins
HSP60 / Chaperonin
ECABU_c46990 (groEL)
Mitochondrial biogenesis [BR:
eab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ECABU_c46990 (groEL)
Exosome [BR:
eab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ECABU_c46990 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
ECABU_c46990 (groEL)
Exosomal proteins of breast cancer cells
ECABU_c46990 (groEL)
Exosomal proteins of colorectal cancer cells
ECABU_c46990 (groEL)
Exosomal proteins of bladder cancer cells
ECABU_c46990 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADN49088
LinkDB
All DBs
Position
4796405..4798051
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagatgcagtgaaagttaccctcggtccgaaaggccgtaacgtagttctg
gataaatctttcggtgcaccgaccatcaccaaagatggtgtttccgttgctcgtgaaatc
gaactggaagacaagttcgaaaacatgggtgcgcagatggtgaaagaagttgcctctaaa
gcgaacgacgctgcaggcgacggtaccaccactgcaaccgtactggctcaggctatcatc
actgagggtctgaaagctgttgctgcgggcatgaacccgatggacctgaaacgtggtatc
gacaaagcagttaccgctgcagttgaagaactgaaagcgctgtccgtaccgtgctctgac
tctaaagcgattgctcaggttggtaccatctctgctaactccgacgaaaccgtaggtaaa
ctgatcgctgaagcgatggacaaagtcggtaaagaaggcgttatcaccgttgaagacggt
accggtctgcaggacgaactggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccttacttcatcaacaagccggaaactggcgcagtagaactggaaagcccgttcatc
ctgttggctgacaagaaaatctccaacatccgcgaaatgctgccggttctggaagctgtt
gccaaagcaggtaaaccgctgctgatcatcgctgaagatgttgaaggcgaagcactggca
actctggttgttaacaccatgcgtggcatcgtgaaagttgctgcggttaaagctccgggc
ttcggcgatcgtcgtaaagctatgctgcaggatatcgcaaccctgactggcggtaccgta
atctctgaagagatcggtatggagctggaaaaagcaaccctggaagacctgggtcaggct
aaacgtgttgtgatcaacaaagacaccaccaccatcatcgatggcgtgggtgaagaagct
gcaatccagggccgtgttgctcagatccgtcagcagattgaagaagcaacttctgactac
gaccgtgaaaaactgcaggagcgcgtagcgaaactggcaggcggcgttgcagttatcaaa
gttggtgctgctaccgaagttgaaatgaaagagaaaaaagcacgcgttgaagacgccctg
cacgcgacccgtgctgcggtagaagaaggcgtggttgctggtggtggtgttgcgctgatc
cgcgtagcgtctaaactggctgacctgcgtggtcagaacgaagaccagaacgtgggtatc
aaagttgcactgcgtgcaatggaagctccgctgcgtcagatcgtcctgaactgcggcgaa
gaaccgtctgttgttgctaacaccgttaaaggcggcgacggcaactacggttacaacgca
gcaactgaagaatacggcaacatgatcgatatgggtatcctggatccaaccaaagtaacc
cgttctgctctgcagtacgcggcttctgtggctggcctgatgatcaccaccgagtgcatg
gttaccgacctgccgaaaaacgatgcagctgacttaggcgctgctggcggtatgggcggc
atgggtggcatgggcggcatgatgtaa
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