Peptoclostridium acidaminophilum: EAL2_808p05370
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Entry
EAL2_808p05370 CDS
T03061
Symbol
helD
Name
(GenBank) helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eac
Peptoclostridium acidaminophilum
Pathway
eac03420
Nucleotide excision repair
eac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EAL2_808p05370 (helD)
03430 Mismatch repair
EAL2_808p05370 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eac03400
]
EAL2_808p05370 (helD)
Enzymes [BR:
eac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAL2_808p05370 (helD)
DNA repair and recombination proteins [BR:
eac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EAL2_808p05370 (helD)
MMR (mismatch excision repair)
Other MMR factors
EAL2_808p05370 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
Viral_helicase1
AAA_19
DEAD
AAA_22
SLFN-g3_helicase
ResIII
AAA_12
AAA_30
nSTAND3
NACHT
PreP_C
DUF2986
Motif
Other DBs
NCBI-ProteinID:
AHM58040
UniProt:
W8TAZ5
LinkDB
All DBs
Position
EAL2_808p:543882..546209
Genome browser
AA seq
775 aa
AA seq
DB search
MHMKNHPEYFEEVERLNETLLYVENTISAAEQNKDAYREEIKDAYINLDYLDSSQSYASI
LVNTRLLDALERNYDGLQRARKKPYFARLDFKQDENGRTDKFYIGKTSLFKAEWEIPMIV
DWRSPIASVYYDGELGSVSYQSATETITGELLLKRQYTLENGTLEGIMDIDITTTDAFLQ
ASLEGNKDNRLKDIVSTIQSEQNAIIRSDIHKPLIVQGVAGSGKTTIALHRIAYLIYNHE
KDFIPENFMIMAPNQLFLNYISEVLPELGADRVKQTTYVDFMHEVIGKKYRLTDSDEKLI
SIINGAVTKDESDSHELLKKASRFKGSMRFKNVIERYIRDIELNFVPDEDVTVEGHTLMT
SKEIKKLFISQYRYLPLYKRIAEIKKNLSNTLKRDKIRILEEIEQFYDKQIEYLRYNEAQ
SEERRKKIVNLIDARDNAMESLKKNSRNIISKYISKFPKKDLLDYYKDLLTNSETLVKYG
NGKLSSEFAEYVSEHSTSIFSKKQMELEDLAGIAYMKHRVFGFDDKLDIRYVVIDEAQDF
SHFQFYALKEILNTKLFTILGDLSQGIHAHRGINNWNFILNNIFDPQESQYLELAQSYRT
TIEIMDLANEVIKMCPIDGLLLAQPVVRHGEKPQAFKFDSDGKIIDALQNNVEQLKSDGY
SSIAVIGKTLDECKKIQKCLAKNKNIETKLLGEKADYSENNVVIVPSYLAKGLEFDAVII
VTLEDAYSQDELDIKLLYVAMTRALHRLCILCKNNTIPAIEKTGILTSGSGNAAV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
ttgcatatgaagaatcatccggaatattttgaagaggtcgaaaggctaaatgaaacgctg
ctttacgtggagaacaccatatcggccgctgagcaaaacaaggatgcataccgcgaggaa
ataaaagacgcatatataaatctcgactatctggacagcagccaaagctacgccagtatt
cttgttaacacacggctgctagacgctctggaaaggaattatgacggcctccagcgggcc
agaaaaaaaccttactttgcaaggcttgatttcaagcaggatgaaaacggaagaacagat
aaattctatataggcaaaacgtctcttttcaaggctgaatgggaaatacccatgatagtg
gactggcgctcacctatcgccagcgtctattacgacggcgaactgggcagcgtttcttac
cagtcagctaccgaaacaataactggagaactgcttctaaaaaggcagtatacactcgaa
aacggaacactcgaaggcataatggacatcgacataacaactacagacgcattcttacag
gcatcgctcgaaggaaacaaggacaacagactcaaagacatagtctcgacaatacagtca
gaacaaaacgcaatcatacgctccgacatacacaagccactcatagtgcaaggagttgca
ggcagcggcaaaacgacaatagcgctgcatcgaattgcatatcttatatataatcacgaa
aaggattttatccccgagaatttcatgataatggctccgaaccaattatttctcaactat
atttccgaagtgcttcccgaattgggagcagacagggtcaagcagacgacatacgtcgat
tttatgcatgaagtaatcggcaaaaaatacaggctgaccgattccgacgaaaaactaata
agcatcataaacggtgctgtcaccaaagatgagtccgattcgcacgagcttctaaaaaaa
gcctcgcgtttcaagggctccatgagattcaagaatgtgatcgaaaggtatattcgcgac
atagagctgaatttcgtgccggatgaggatgtaaccgtagaaggacatacgcttatgaca
tccaaagaaataaaaaaacttttcatcagccagtacagataccttccgctgtacaaaaga
attgcagaaataaaaaagaatctctcaaacacgctcaaaagagacaaaatcagaattctt
gaagagattgagcaattctacgacaagcagatagaatacctacggtacaatgaggcgcag
tcagaagaaaggcgtaaaaaaatagtaaaccttattgatgccagagacaacgcaatggaa
tcgttaaagaaaaactccagaaatataatatccaaatatatttcaaagtttcccaaaaaa
gacctgctcgactattacaaggacctactgacaaacagtgaaacccttgtaaaatacggc
aacggcaaactcagcagcgaattcgccgaatatgtgagcgagcattcaaccagcatattc
agcaaaaagcaaatggagcttgaagaccttgccggcatagcttatatgaagcacagggtt
ttcggattcgatgacaagcttgacatcaggtatgtggtgattgacgaggcacaggatttc
agccatttccagttttatgcgctcaaggagatattgaacaccaagctcttcacgatacta
ggggacctatcgcagggaatccacgctcacagagggataaacaactggaattttattctg
aacaacatattcgaccctcaggaaagccagtacctagaactagctcaaagctacaggacc
acaattgaaataatggacctggctaatgaagtaatcaaaatgtgcccgatagatggatta
ctattggcgcaaccggtagtgcgccacggggaaaagccccaagcctttaaattcgattct
gacgggaaaatcatagatgctttgcagaacaatgttgagcagttaaaatccgatggctat
agctcaattgccgtgataggtaaaacgctagatgaatgtaaaaaaatacaaaaatgccta
gccaaaaacaagaatatcgaaacaaagctgctcggtgaaaaggctgactacagcgaaaac
aatgtagtgatagttccttcatacctggcaaaagggctggaattcgacgctgtaataatt
gttactttggaggatgcctattctcaggacgaattggatatcaagctgttgtatgttgcc
atgacgagggctttgcacaggctttgcattttatgcaagaataacactattccagccatt
gaaaaaacaggtatactgacatctggatctggaaacgcagctgtttag
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integrated database retrieval system
