| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
eac Peptoclostridium acidaminophilum
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:eac00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EAL2_c01500 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:eac03021]
EAL2_c01500 (rpoC)
03400 DNA repair and recombination proteins [BR:eac03400]
EAL2_c01500 (rpoC)
Enzymes [BR:eac01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EAL2_c01500 (rpoC)
Transcription machinery [BR:eac03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EAL2_c01500 (rpoC)
DNA repair and recombination proteins [BR:eac03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EAL2_c01500 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
133015..136503
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| AA seq |
1162 aa
MFELGNFESMKIGLASPEKIRQWSRGEVKKPETINYRTLKPERDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRSLEKVLYFASYIVTDSGSTSLSEKQLLTEKEYRDAVEKHGNAFKAGMGAEAVMALLE
KIDLELLSKELRGKLKDSTGQKRIRTIRRLEVVEAFKKSGNRPEWMILDAIPVIPPDLRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDIIVRNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKFYQCGLPKK
MALELFKPFVMNALVEKGHAHNIKSAKRMVEKVKPEVWDVLEDVIKGHPVLLNRAPTLHR
LGIQAFEPVLVEGKAIKLHPLVCTAYNADFDGDQMAVHLPLSVEAQAECRFLMLSVNNIL
APKDGSSITTPSQDMVLGSYYLTIEIEGVKGEGMMFKDYNEMLLAYTNKAVDLHARVKVK
KVLSDGAIVFVESTVGRFIFNENLPQDIGFVDRKKDPHSLEVDFLVDKKKLGQIIDKCFR
KHGNTITAIMLDTIKELGFKFSTRGAITVSIADMEIPQEKYKLISDAETKVAKYEKAFRR
GLISNEERKERVIDTWTETTEKVTEALMNNLGRLNNIFIMAHSGARGSKNQIRQLAGMRG
LMADATGETVELPVKSNFREGLSVLEYFISSHGARKGLADTALRTADSGYLTRRLVDVSQ
DVIIREEDCGTTEGIEVKAFKDGNEVIEELYDRIVGRYISSDIVNPETGELILSANDLIT
EEKAEEIVSSGVKKVYIRSALSCRTQHGVCAKCYGRDLATGKNVNVGEAVGIIAAQSIGE
PGTQLTMRTFHTGGVAGGDITQGLPRVEELFEARKPKGLAIISEMDGSVHIKESGNKREI
VITDEAGEAKTYLIPYGSRIKAKEGQFVEAGDPITEGSINPHDILRVKDVVGVQNYIVQE
VQRVYRMQGVDINDKHIEIIVRQMLSKVRVEEEGDTEFLPGGLVDILEFGDENERVVAEG
GEVATSKRVLLGITKASLATESFLSAASFQETTRVLTEAAIKGKEDKLIGLKENVIIGKL
IPAGTGMKRYKDLAIQRPDQES |
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| NT seq |
3489 nt +upstreamnt +downstreamnt
ttgtttgaattaggtaatttcgagtcgatgaaaataggtttagcttcgccagaaaagata
aggcaatggtctagaggagaagtcaaaaaacctgaaaccataaactacaggactctcaag
ccggaaagggacggtcttttctgcgaaaggatattcggaccgcagaaggactgggagtgt
cactgcggaaaatacaagagagtaagatacaaaggcgtcgtttgtgacagatgtggagtt
gaggtcacaaaggccaaggtaagacgtgagaggatgggccatatagagctggcggcgcca
gtttctcacatatggtatttcaagggcattccgtccagaatgggactgttgcttgacatg
tcaccgcgttctcttgaaaaggttctgtattttgcatcgtatatagtgacagattcaggc
agcacttcactaagcgaaaagcagctgcttacagaaaaagagtacagagatgcagtggaa
aagcatgggaatgcattcaaggcgggaatgggggcagaggccgtaatggctctgcttgaa
aagatagatcttgagctgctctcaaaagagcttaggggaaaactgaaagacagcacaggc
caaaagaggataaggactatcagaaggctggaggttgtagaagctttcaaaaagtctggc
aacagaccggagtggatgattttagatgccataccggtaatacctcctgatcttaggcct
atggttcagcttgacggaggaaggtttgcaacatcagatctcaacgatctttacagaaga
gttataaacagaaacaacaggcttaaaagactgcttgagcttggagcgcctgatataata
gtccgaaacgaaaaaagaatgcttcaggaagccgtagacgcgttaatagacaacggcaga
aggggaagacctgttaccggaccaggaaacagaccgcttaagtcactttcagacatgcta
aagggtaagcagggacgtttccgtcagaacctactcggaaagcgtgttgactactctgga
cgttcggttatagtagtaggacctgagcttaaattctaccagtgcggacttccaaagaag
atggctctggagcttttcaagccgtttgtaatgaatgcccttgttgaaaagggccatgct
cacaatataaagagcgctaagaggatggtcgagaaggtgaagcctgaggtatgggatgtg
cttgaagatgtcataaaaggccacccggtgctcctaaaccgtgcacctacgcttcacaga
ctgggcatacaggcgttcgagccggtgcttgttgaaggaaaggctataaagcttcacccg
cttgtatgtacggcgtacaacgccgactttgacggcgaccagatggctgtccaccttccg
ctgtcggtggaggcacaggcggaatgcagattcctgatgctttcagtaaacaacatcctg
gcgccaaaagacggatcttcaataacaacgccaagccaggatatggtgcttggaagctac
tatcttacaatcgagatagaaggcgtaaagggcgagggcatgatgttcaaggattacaac
gagatgctgcttgcatacactaacaaggcagtagaccttcatgcaagggttaaagtcaaa
aaagtgctatctgacggagctatagtttttgttgaaagcacagtgggcagattcatattc
aacgaaaaccttcctcaggacattggctttgttgataggaaaaaagacccgcattcgctt
gaagttgatttccttgtagacaagaaaaagctggggcagataatagacaaatgtttcaga
aagcacggaaacactataacagccatcatgctcgacactataaaggagctgggcttcaag
ttctccacaagaggggcgataacagtttcgatagccgacatggagataccgcaggaaaaa
tacaagcttatatctgacgcagaaacaaaggttgcaaaatatgaaaaggcgttcagaaga
ggtcttatctcaaatgaagagagaaaagaaagagttatagacacttggactgagacaacg
gagaaagttaccgaagctcttatgaacaatcttggaaggctaaacaacatattcataatg
gcgcactctggagcgaggggaagtaaaaaccagataagacagcttgcgggaatgcgtgga
cttatggctgatgcgacaggtgaaacggtagaacttccagttaagtctaacttccgtgaa
ggcctttcggttcttgagtacttcatatcttcacacggagccagaaaaggacttgcggat
acagcccttcgtacagcggactcgggatacctcacgagaagacttgttgacgtgtctcag
gatgttataataagggaagaggactgcggaacaactgaaggaatagaagtaaaagccttt
aaagacggcaatgaagtaatagaggagctctacgacagaatagtcggaaggtatatatcc
agcgatatagtgaatccggaaacgggagaactgattctctctgcaaacgacctcattacc
gaagagaaggcagaagaaattgtgtcatcaggagtgaagaaagtctatatcagatcggcg
cttagctgcagaactcagcacggtgtatgtgccaagtgctacggcagggatctcgcaacg
ggcaagaatgtaaacgtaggcgaagctgtcggcataatagcggcacagtcgataggtgag
cctggaacgcagcttacgatgcgtacattccacaccggcggagttgcgggcggcgatata
actcagggtcttccaagggttgaagagctttttgaggctagaaagcctaaaggccttgcg
ataataagtgaaatggacggctctgtgcacatcaaggaaagcggcaacaagagagaaatc
gtcataactgatgaagcgggcgaagccaagacatacctgataccatacggttcgaggata
aaggcaaaggaaggccagtttgtagaggccggagatcctataaccgaaggttcaataaac
cctcatgacatactaagggtcaaggatgtagttggagttcaaaactacattgtccaagaa
gttcaaagggtttatagaatgcagggcgttgatataaatgacaagcatatagaaataata
gtaaggcagatgctctctaaggtaagagttgaagaagagggagacactgaattccttcca
ggaggacttgtagacatacttgaatttggcgatgaaaatgaaagagttgtagctgaaggc
ggcgaagtagcaacttcaaaaagagttctgctgggaataacaaaagcctcacttgcaaca
gaatcattcctgtcagctgcatcgttccaggagactacaagagttcttaccgaagcagca
ataaaaggaaaagaagacaagctaataggtcttaaggaaaatgtaataataggaaagctc
atacctgcaggtacaggaatgaaaagatacaaggacttggcaatccaaagaccggatcaa
gagagttag |
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