Peptoclostridium acidaminophilum: EAL2_c03110
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Entry
EAL2_c03110 CDS
T03061
Symbol
yrrC
Name
(GenBank) YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
eac
Peptoclostridium acidaminophilum
Pathway
eac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EAL2_c03110 (yrrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eac03400
]
EAL2_c03110 (yrrC)
Enzymes [BR:
eac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EAL2_c03110 (yrrC)
DNA repair and recombination proteins [BR:
eac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAL2_c03110 (yrrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
HHH
NAT10_TcmA_helicase
PIF1
AAA_22
SLFN-g3_helicase
HHH_2
UvrD-helicase
AAA_28
AAA
nSTAND3
HHH_3
T2SSE
AAA_29
TraI_hel_assoc_N
NTPase_1
ABC_tran
SRP54
AAA_23
AAA_16
RsgA_GTPase
cobW
TrwB_AAD_bind
AAA_24
AAA_18
UvrD_C
UPF0758_N
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AHM55614
UniProt:
W8T1J2
LinkDB
All DBs
Position
270158..272383
Genome browser
AA seq
741 aa
AA seq
DB search
MEKIKGMITDIVFQNEDNGYTVAQMRTSDDEITIVGCLPTLKIGETIEAGGTWKSHETYG
MQFQAESFMPAVPSSVDGILAYLSSGAVKGIGAKMAKRIVDCFGVETMMVLQQSPEKLTK
VEGIGKKKAAEIAKAFSEDRCMRNLMMELLPYGIGTQHCLKIYKRYGDSAMERVRQNPYA
LSGEISGIGFKTADKIGISLGIDMRSSSRIRQGIMHTLRESASSGHTYLPRTEAAAKAAS
LLEIEKEGVDEQIYEMALDELIHVENAQSGERVYMYPYYIAENGSCSMLIDLASAQLELP
EEDLEQRLDSVEAEAGISLASRQKEAVLKVFERGVTVITGGPGTGKTTTINSLIKLLEGL
ELKVKLAAPTGRAAKRMSETTGKEAATIHRLLEMAYSEDEEVMLFLKGEDDQLECDALIV
DEASMIDIMLMYNLLKAVKKGTRLVLVGDVDQLPPVGAGNVLSDIITSGAVGVVRLDEIF
RQARESMIVVNAHMINKGEMPLLNQKDKDFFFIGRQGPIATAEEVVSLVAKRLPEYYNLD
PVRDIQVISAMRKGEAGVTRLNELLQSSLNPASAHKVEEKLGRRIFRVGDKVMQTRNNYE
KKWESEDGTQKGQGVFNGDIGYVFHVDKSDKALFIVFDDIKVARYDFSELDEIDHSFCTT
VHKSQGSEFEAVVMPLSWAPPMLLTRNLLYTGITRAKRLVVLVGERRFLEAMVKNVRNES
RYCALGEKLMRFIEEGILGED
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaataaaaggaatgataacagacatagtcttccagaacgaagacaacggctac
accgtcgcccagatgcgaacaagtgacgacgaaatcacaatagtaggctgccttcccacg
cttaaaataggcgagactatagaagccggaggcacatggaaaagccacgagacctacggc
atgcagttccaggcggaaagcttcatgcctgctgtgccttcatcagttgacggtatactc
gcatatctttcatcgggagcagtaaagggcataggcgccaagatggccaaacgtatagtc
gactgcttcggagtcgagacaatgatggtcctccagcaaagccctgaaaagctcactaaa
gtagagggcataggaaagaaaaaggccgccgagatagccaaggccttttcggaggacagg
tgcatgagaaacctcatgatggagctgctgccatacggcataggaacccagcactgcctc
aagatatacaaaagatacggcgactcggccatggagcgtgtgaggcaaaacccctacgcc
ctctccggcgagataagcggcataggcttcaagacggccgacaagataggcataagcctg
ggcatagacatgagatcgagctcaagaatcaggcaaggcataatgcatacgctcagagaa
tctgcatcctcggggcacacctaccttccaagaacggaagccgcagctaaggccgccagc
cttcttgaaatagaaaaggaaggcgtagatgagcagatatacgaaatggccctcgatgag
ctgatacacgttgaaaacgcgcaaagcggcgagcgggtgtacatgtatccctactacata
gccgaaaacggatcctgcagcatgctgatagacctggctagcgctcagctggagctgccc
gaagaggacctcgagcagagactagactctgtagaggcggaagccggaataagccttgca
agcaggcaaaaggaggcagtgctcaaggtctttgaaagaggagtcacagtgataaccgga
gggccaggaacgggaaagacgacgacaatcaattcgctgataaagctcctagaaggcctc
gagctcaaggtaaagctggcggccccgactggaagggcagcaaagagaatgagcgagacg
acaggcaaggaggccgcgacgattcacaggctgcttgaaatggcatactcagaagacgag
gaggtcatgctctttctaaagggcgaggacgaccagctagagtgcgacgccctcatagtt
gacgaggcctccatgatagacataatgctaatgtacaacctcctgaaggcagtcaaaaag
ggcactcgtcttgtgctcgttggcgatgtggaccagctgccaccggtgggcgcgggcaat
gtcctttccgatataataacatcgggcgcggtgggcgttgtaaggctcgacgagatattc
aggcaggccagggagagcatgatagtagtcaatgcccacatgataaacaagggcgaaatg
ccgcttctaaaccaaaaggacaaggactttttcttcataggcaggcaggggcccatagca
acggccgaggaggtcgtatcgcttgtggccaaaaggctgcccgagtactataacctggat
cctgtaagggacattcaggtgatatcggcaatgagaaagggcgaagcgggagtcaccagg
ctcaatgagctgctccagagttctctcaatccggcatccgcgcacaaggtcgaggagaag
ctcggcaggaggatattcagggtcggcgacaaggtaatgcagacaaggaacaactacgag
aagaagtgggagagcgaggacggcacacaaaaaggccagggcgtattcaacggcgatatt
gggtatgtattccacgtagacaaatctgacaaggcgcttttcatagtctttgacgacatc
aaggtggcgcgctatgattttagcgagctggacgaaatagaccacagcttttgcaccacg
gttcacaagagccagggcagcgagttcgaagcggtcgtaatgcctctttcctgggcgccg
cccatgctgctgacaaggaacctcctatacacagggattacaagggcaaagcggcttgta
gtgctcgtgggagaaaggcgctttctcgaggccatggtaaagaacgtaaggaacgagagc
cgctattgcgccctgggcgaaaagcttatgcgcttcatagaagaaggcatactgggagag
gattag
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