Entry |
|
Symbol |
sbcD
|
Name |
(GenBank) nuclease sbcCD subunit D
|
KO |
K03547 | DNA repair protein SbcD/Mre11 |
|
Organism |
eac Peptoclostridium acidaminophilum
|
Brite |
KEGG Orthology (KO) [BR:eac00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:eac03400]
EAL2_c08290 (sbcD)
DNA repair and recombination proteins [BR:eac03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAL2_c08290 (sbcD)
Archaeal homologous recombinant proteins
EAL2_c08290 (sbcD)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
832470..833660
|
AA seq |
396 aa
MKIIHTSDWHIGKIVNGFSMLEDQKHALEQLVSILEEERPHALVIAGDIYDRSIPPVEAV
ELLDCVLSKILLELEIPVLVIAGNHDSPERLSFGSRLLSKKGLHIAGVLGSEIKKVQLND
EFGPVDFYLIPYSDPREARHILADEDISTHDDAMRKITDRIKEENGDANRSVAVAHGYVA
YSKKSCNGDLCEIEEPIRCESERPLSVGGSEIIEADCFESFCYAALGHLHGPQRVGSEKA
RYSGSLLKYSFSEASHKKGVIAVDIDEAGNVETRHLPLEPLRDMRVIKGPLKELINPNIY
SCGDTSDYVFAILADEGELFDPISKLRAVYPNIMGLERSQAMESAASRTAAGKGHREKSK
LELFEEFYVSICGRNISEEGKSIVKEAIDSAEKGTD |
NT seq |
1191 nt +upstreamnt +downstreamnt
atgaaaataatccacacttctgactggcatataggcaagattgtgaacggattcagcatg
ctcgaggatcaaaagcacgcacttgagcagcttgtgagtattttagaggaggaaaggccc
cacgcgcttgtaatagcaggcgacatttacgacaggagcatacctcctgtggaagcagtc
gaactgcttgactgcgtacttagcaagatactgcttgaacttgaaatccctgtgcttgta
attgcgggcaatcatgacagcccggaaaggctgtcgtttggaagcaggctgctgtcgaag
aaggggctccacattgccggagtacttggctcggaaataaagaaggtacagctcaatgac
gaattcggacctgtggatttctatctgataccatactcggatccgcgggaagcaaggcac
atattagcagatgaggatatatcaactcacgacgatgcaatgagaaaaataacggacagg
ataaaagaagaaaatggtgatgctaataggagcgtggcggtggctcacggatatgttgca
tattcaaaaaaaagctgcaacggggacttgtgtgaaatcgaagagccgatacgatgcgaa
tccgaaaggccgcttagcgtaggaggcagtgaaatcatagaggctgactgctttgaaagt
ttttgctatgcagctttaggacacctgcatggacctcaaagagtcggaagtgaaaaggca
agatattcaggctcgcttcttaaatattctttttctgaagcatctcacaaaaaaggcgtc
atagctgtagatatagatgaagcaggcaatgtggaaacgaggcatctgccgcttgagcct
ctaagagatatgagggttataaaaggacctcttaaagagcttataaaccccaatatatac
tcgtgcggggatacaagcgactatgtgtttgccatacttgctgatgaaggagagcttttt
gatcctatatccaagctgagagccgtttatccaaacattatgggactcgagagaagccag
gcgatggaatctgcagcaagcaggacagctgccggaaaagggcatcgcgaaaagtctaag
cttgagcttttcgaggagttctatgtatcgatatgcggcaggaacattagcgaggaaggc
aaaagcattgtcaaagaggctatagactctgcagagaaagggactgattaa |