Peptoclostridium acidaminophilum: EAL2_c08300
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Entry
EAL2_c08300 CDS
T03061
Symbol
sbcC
Name
(GenBank) nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
eac
Peptoclostridium acidaminophilum
Brite
KEGG Orthology (KO) [BR:
eac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eac03400
]
EAL2_c08300 (sbcC)
DNA repair and recombination proteins [BR:
eac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAL2_c08300 (sbcC)
Archaeal homologous recombinant proteins
EAL2_c08300 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
AAA_21
nSTAND3
Herpes_UL6
AAA_18
AAA_16
GTP_EFTU
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHM56130
UniProt:
W8T5M4
LinkDB
All DBs
Position
833663..836800
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AA seq
1045 aa
AA seq
DB search
MRPIRLVMSAFGPYAGEETLDFRNLKDNNIFLITGPTGAGKTTIFDAISYALFGEASGSS
RDKSDLRSDFAQADTPTYVELEFELRGKSFQIKRYPQQEKKKSRGEGYTMKEASAELVLP
DGSVVTRINSVDEKIGEILGISRNQFRQVVMLPQGEFRKLIESESREREEIFRKIFGTQA
FETIQKILQENRKQLRMAISDAKSKLETNVRRIDPEGDEALAVLIESGELNVGEILTRSR
MLIKSDEELQAALSKRLEQSRLNQEKLQKTMIEAVEVNKKLRERDSAGEKLAGLESRKKE
YEGKAYRLAMGRKALEISIVDESVKEKFFLLDSKKAEYIQLAKRLEFCEKELKISQETLI
LEEGRAHERKATAEDITRLGGFVQKVKEYEEKQKAIKLIKDALSGKQKELESLKSELEIN
KASQKKQTEELRLSNEAQIQKEKFEKQLHEKELLLSRLRTFYGTLDKLAAEQIRHLILEK
EYEAFEKTFLAAKASYEKIEDMFRKGQAGLLARSLEEGSPCPVCGSKNHPLPALLIEGMP
TEEVLRRAQEAYENVKLERDKRLQDMAALNGSIKSIRDSVSEQKESLKPELGEELTVIQD
DALQEYLEKQGKELRYKFDELKKSHEGLERLAKSKEAIEESIKRLGVSIEEKEKMHGKLE
EDKNELQMRRKGEEGVLESIENEIPPQLRSLDRLSEKNKALEEKLRAMEKDLDKARESHS
KAQLDKAKIEKEKEAAAKASAESEKEIEALKARMEEMLLAAGFKDYSHYEAQKMSKQDIE
ETDGEINKYYQELKSAADRLEKAQVEAEGLLKISIEGTEEELAGVKQLCDELDAIIKKVY
ARQDGNLKALSEMERIVCEIERQEEHFSVAGELASIANGDNPERLTFERYVLAAYFDEII
KAANARLAKMAQGRFLLMRKDERGKGRKQEGLELEVFDNYTGKARHVKSLSGGEGFKASL
SLALGMADIVQSYTGGVSLDTIFIDEGFGSLDPESLDSAVECLVDLQESGRLVGIISHVP
ELKESINARLEITASKNGSKASFAM
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgataagactggtgatgagcgcttttggcccctatgcaggggaggagactctt
gattttagaaacttaaaggacaacaacatatttcttataacaggcccaactggagcaggg
aagacaacaatattcgacgccataagctatgcactgtttggagaagcttccggaagcagc
agggacaagagcgatttgagaagcgactttgcgcaggcggacactcccacatacgtggag
cttgaatttgagctcaggggaaaaagcttccaaatcaagagatacccgcagcaggaaaag
aaaaaatcaaggggagaaggctatacgatgaaggaagcaagcgctgagcttgtattgcct
gatggttcggtagttaccaggataaacagtgttgacgaaaagataggcgagatactcggc
ataagcagaaatcagttcagacaggtagtaatgctgccgcaaggggagtttaggaagctc
atagagtctgaaagcagggaacgtgaagagatattcagaaagatatttggaacccaggcc
tttgaaacaatacaaaaaatactgcaggaaaacagaaaacagcttcgtatggcaataagc
gatgctaaatcaaagctggaaacaaatgtgaggcgtatagaccctgagggagatgaggca
cttgcggttcttattgagtcgggagaactaaatgtgggcgaaattttgactagaagcaga
atgcttataaagagcgatgaagagcttcaggcagcactttcaaaaaggcttgaacaaagc
agacttaaccaggaaaagcttcaaaagacaatgatagaggcagtagaagtcaacaagaaa
ctacgtgaaagggattctgccggagagaaacttgccggcttggagtctcgtaaaaaagaa
tatgaaggcaaagcatacaggcttgccatgggaagaaaggcgcttgagatttcaatagtg
gatgagtcggtaaaagaaaaattttttttactggattctaaaaaagctgaatatatacag
cttgccaaaaggctggagttttgtgaaaaagaactaaaaatcagccaggaaacgctaata
ttagaagagggaagggcgcatgaaagaaaagcgactgccgaagatattacgcggcttggc
ggttttgttcagaaagtgaaggaatacgaggaaaagcaaaaagccatcaagctcatcaag
gatgccctatcgggtaagcaaaaagaactggaaagcttaaagagtgagctggagataaat
aaagctagtcaaaagaagcaaacagaagagcttaggctttcaaacgaagcgcaaatacaa
aaggaaaaattcgagaagcaattgcatgagaaagagttgctcctctcaaggctcaggacg
ttttatggcacgttagacaagctcgcagcagagcagattagacatctgattctagaaaaa
gagtatgaagcttttgaaaagacgtttttagccgcaaaagcgtcatatgaaaaaattgag
gacatgttcaggaagggtcaggcaggactccttgcaaggagtctggaggaaggcagccca
tgcccggtttgcggctcaaaaaatcatccgttgccagccctattaatagagggcatgccg
actgaagaggttctgaggcgggcgcaggaagcatatgaaaatgttaagcttgaaagggac
aaaaggctgcaggacatggcggcattaaacggcagcatcaagagcatcagggattctgtt
tcagaacaaaaagagagcctcaagccggagttgggcgaagaactcacggtaattcaagac
gatgcgcttcaagaatacctggaaaagcagggaaaagagctaaggtacaagtttgatgaa
cttaaaaagagccatgaaggccttgaaaggctggcaaaaagcaaggaagccatagaagag
tccatcaaaaggctgggagtcagtatagaagaaaaagaaaaaatgcacggaaagcttgaa
gaggataaaaatgaactgcaaatgaggagaaagggcgaggagggcgtgcttgaatcaata
gaaaatgaaatacctccgcaactacgctccctggacaggctatctgaaaaaaacaaggca
ctggaagaaaaacttcgtgcgatggaaaaggacctggataaggcgcgcgagagccacagc
aaagcacaactagacaaggcaaaaatcgagaaggagaaggaggccgcagcaaaagcatca
gccgagtcagaaaaggagatagaggcattgaaagctcggatggaggaaatgcttttagcg
gcaggctttaaggactacagccattatgaagctcagaaaatgagcaagcaggatatcgaa
gaaacagacggagagattaataaatactatcaggagctaaagtcagcagcagacaggctt
gaaaaagcacaggttgaagctgaggggctccttaaaatatcaatagaaggcactgaggaa
gagctcgcaggcgtgaagcagctgtgcgatgagcttgatgctataataaagaaggtatat
gcgaggcaagacggtaatttgaaagcactgagtgaaatggaacgaatagtctgcgaaatt
gagcgccaagaggagcactttagcgttgcaggcgagctggcaagcatagcaaacggtgat
aacccagaaaggctgacatttgaaaggtacgtgcttgcagcatactttgacgagataata
aaggcggccaatgcaagactagctaagatggcacagggcaggttcctgctaatgagaaag
gacgagaggggcaagggcagaaagcaggaagggcttgagcttgaagtgttcgacaattac
acaggcaaggcaagacacgtaaaaagtctttccggtggagaagggttcaaggcgtctctt
tctcttgcgcttggaatggctgacatcgtacagtcatacaccggcggtgtaagccttgat
acgatctttatagacgagggctttggttccctcgatccggaatcgcttgacagcgctgta
gaatgcctcgttgaccttcaggaatcgggaaggcttgtgggcataatatctcacgtgcca
gagctaaaggagagcataaatgcaaggctcgagataacggcatcgaaaaacggaagcaaa
gcaagtttcgccatgtga
DBGET
integrated database retrieval system
