Peptoclostridium acidaminophilum: EAL2_c12440
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Entry
EAL2_c12440 CDS
T03061
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eac
Peptoclostridium acidaminophilum
Brite
KEGG Orthology (KO) [BR:
eac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eac03032
]
EAL2_c12440 (topA)
03400 DNA repair and recombination proteins [BR:
eac03400
]
EAL2_c12440 (topA)
Enzymes [BR:
eac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EAL2_c12440 (topA)
DNA replication proteins [BR:
eac03032
]
Prokaryotic type
DNA Topoisomerases
EAL2_c12440 (topA)
DNA repair and recombination proteins [BR:
eac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EAL2_c12440 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
NDT80_PhoG
Toprim_4
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
AHM56539
UniProt:
W8T456
LinkDB
All DBs
Position
1237130..1239193
Genome browser
AA seq
687 aa
AA seq
DB search
MAKNLVIVESPAKAKTIGKFLGSNYKVKASVGHVRDLPKSKLGVDIENEFEPQYITIRGK
GPTINEIKKEAKKSDRIFLATDPDREGEAISWHLANILKLDEKEACRIEFNEITKDAIKK
AIKTPRQIDTDLVDAQQARRVLDRLVGYQISPLLWDKVRKGLSAGRVQSAVTKIICDREK
EIDAFEPKEYWTLDITAAKEDGSKIEFKFHGDKENKIEINSEQETNNIIDAINNKELDIS
QVEKKERKRKAMPSFTTSSLQQEAASRLNFTTKKTMMVAQQLYEGIDVKGEGNVGLVTYI
RTDSTRISDEAVDKAKEYIVSEIGEKYFKGFEKSKSKAKKVQDAHEAIRPTYIDKTPDSI
KDSLSSDQYKLYKLIWERYTASLMKDSIYDGMSVLADAGGYSFKATGSKLKFDGFLKVYS
FAKQEDTILPDVSVGEKLSIVETMPKQHFTQPPPRYSEASLVKTLEELGIGRPSTYAPTI
STILARGYVEKQGSALKPSELGVLINEIMEKNFDYIVDVKFTADMESKLDLIEEGKLKWK
SIISEFYGPLKVSIEKAEETIEKISMDEETDEICDKCGANMLIKYGRFGRFLACKNYPEC
KSTKPLLNKTGLACPKCKEGDLVERRSKRGRFFYGCSRYPECDFVSWDKPTGEMCPECGE
FLVEKYTKKETKIKCSNKECGYVKTEK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatctagtcatagttgaatcacctgccaaagctaaaacaatagggaaattt
ctcggaagcaattacaaggttaaagcctctgtaggacacgttagagatttgcctaaaagt
aagcttggagttgacatagaaaacgaatttgagccccagtatataacaataagaggcaag
gggcctacaataaacgagattaaaaaggaagccaagaaatcagacaggatatttcttgcg
accgaccccgacagggaaggtgaggctatttcatggcatcttgccaacatactcaagctt
gatgaaaaagaggcgtgcaggatagagtttaatgagataacaaaggacgccataaagaaa
gctatcaaaaccccaaggcagattgacacggaccttgtggacgcccaacaggccagaagg
gttctggataggctggtgggctaccagataagtcccctgctgtgggacaaggtcagaaaa
ggactcagcgccggcagggtacaatcggctgtcacaaagataatatgcgacagggagaag
gagatagatgccttcgagcccaaggaatattggacactcgacattacggctgcaaaggaa
gacggcagcaagattgaattcaagttccatggagacaaggaaaacaagatagaaataaac
agcgaacaagagacaaacaatattattgatgcaataaacaacaaggaactggatatatct
caggtggagaaaaaggagagaaaaagaaaggccatgccttccttcactacgagctcactc
cagcaggaagcggcaagcaggctgaacttcacaacaaagaagacgatgatggtggcccag
cagctgtatgagggcatagacgtaaagggagaaggcaatgtcggacttgttacgtacatc
aggacggactccacgaggatatcggacgaagctgtcgacaaagctaaggaatatattgtt
tctgaaataggagaaaaatatttcaagggcttcgaaaagagcaagagcaaggccaaaaag
gtgcaggacgcacacgaggccataagaccgacatatattgacaagacgccggattcaata
aaggattcgctgagctctgaccagtacaagctctataagctgatttgggagagatataca
gcctcgcttatgaaggattccatatatgacggaatgagcgttctggcggatgctggcggt
tatagcttcaaggcgaccggctcaaagctcaagtttgacggattcctcaaggtatacagc
tttgcaaagcaggaggatactatactgccggatgtaagcgtaggagagaagctgagcatc
gtggaaaccatgccaaagcagcactttacccagccgcctccgcgttattctgaggcatcg
ctggtaaagacacttgaggagcttggaataggaaggccaagtacgtatgctcctaccata
tcgacgatactggcaaggggatatgttgaaaagcaaggcagcgcacttaagccttcggag
cttggtgtgctaatcaacgaaataatggagaaaaatttcgactatatagtggatgtcaag
ttcacggcggatatggaaagcaagcttgaccttatagaggaaggcaagcttaagtggaaa
agcataatttccgaattttacggaccgcttaaggtctcgatcgagaaggccgaagagact
atagagaagatatctatggatgaggagacagatgaaatctgcgacaagtgcggagcgaac
atgctcataaagtacggcagattcggaagattccttgcatgcaagaattatcccgagtgc
aaaagtacaaagccgcttctcaacaagacaggcctggcatgcccaaaatgcaaagaggga
gatcttgtcgagagaaggagcaaaagaggaaggtttttctatggctgctcaaggtatccg
gaatgcgattttgtatcgtgggacaaacccacaggcgaaatgtgcccggaatgcggcgaa
ttccttgtggaaaaatacacaaaaaaagaaacaaaaatcaaatgttcaaacaaggaatgc
gggtatgtaaagactgaaaagtaa
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