Peptoclostridium acidaminophilum: EAL2_c13150
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Entry
EAL2_c13150 CDS
T03061
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase Pnp
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eac
Peptoclostridium acidaminophilum
Pathway
eac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAL2_c13150 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eac03019
]
EAL2_c13150 (pnp)
03016 Transfer RNA biogenesis [BR:
eac03016
]
EAL2_c13150 (pnp)
Enzymes [BR:
eac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EAL2_c13150 (pnp)
Messenger RNA biogenesis [BR:
eac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EAL2_c13150 (pnp)
Transfer RNA biogenesis [BR:
eac03016
]
Prokaryotic type
tRNA degradation factors
EAL2_c13150 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
OB_RRP5_4th
PCB_OB
Plant_NMP1
DUF5659
TsaD
Vip3A_N
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AHM56610
UniProt:
W8T6V6
LinkDB
All DBs
Position
complement(1317874..1319964)
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AA seq
696 aa
AA seq
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MYSSYEMNLAGRALTVEIGKVAEQADGSCMVRYGDTVVLATVCASASPREGIDFFPLSVD
YEEKTYAVGKIPGGFIKREGRPSERAVLTSRLIDRPIRPLFPKGYRNEVQVITKVLSVDQ
DCNPDIVAMIGSSIALSISSVPFAGPTGAVSVGLVDGQLVVNPRLDERENSAMYLVVSGT
RDAIMMVEAGADEVSEEIMIEAIIEAHDEIKKIVDFVDGIVAKEGKAKQEYVVFETDPQI
KEMVNEYATDKMVSAIRTADKLERVENMDKVKAETAAYFEEKYAEGFGEIEKDVKAALDS
LVKTQVRTMIAKEGIRPDNRGLEEIRPIWSEVGVLPRTHGSALFTRGQTQALTIATLGAL
GDVQRLDGLDEKEEKRYMHHYNFPPFSTGEAKFLRGPGRREIGHGALAERALEPVLPSKD
EFPYAIRLVSEILSSNGSSSMASVCGSTLSLLDAGVPVKDMVSGIAMGLIKEGDSIAILS
DIQGMEDFLGDMDFKVAGTKKGITAIQMDIKIHGIDRSVLENALRQAKEGRFFILGKMQE
TMTAPRTELSPYAPRIIQMLIDVDKIRDVIGPGGKVITKIVEETGVKIDIENDGRVFITA
ENLEAGEKAKAIIENIVKVPEVGEVYTGKVTRLMKFGVFVEILPGKEGLIHISNIAHERI
EKVEDALNVGDVVQVKLMEIDDQGRINLSRKALLEK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtagttatgaaatgaacctggcgggaagagcgctgactgttgagattggcaag
gttgcagagcaggctgatggaagctgcatggtaagatacggggacacggttgtgcttgca
actgtatgtgcttcagcttcacctagggaaggtatagactttttccctctgagcgttgat
tacgaggagaaaacttatgctgtaggtaaaatcccgggaggtttcataaaaagagaagga
agaccttcagagagggcagtattgacctcgagacttatagacaggccgataaggccgctt
ttcccaaagggatacagaaacgaagttcaggtcataacaaaggtgctttctgtagatcag
gactgcaatcctgacatagttgctatgataggctcatctatcgccctttcaatatcatca
gttccttttgcagggcctacgggagcggtttcagtaggactcgttgacggccagcttgtt
gtgaatccaaggcttgacgaaagggaaaatagcgcaatgtatctagtggtttcaggtaca
agagatgccataatgatggtcgaagcaggcgcagatgaagtaagcgaagagataatgatt
gaagccataatcgaggctcatgacgagattaagaaaatagtcgatttcgttgacggtata
gttgccaaggaaggaaaggcaaagcaggaatatgttgtatttgaaaccgatccccagata
aaggaaatggttaatgaatacgcaaccgataaaatggtttctgccataagaactgccgac
aagcttgaaagagtagaaaacatggacaaggtcaaggccgagacagcagcctatttcgag
gagaaatatgctgaaggcttcggcgagattgaaaaggacgtcaaggctgcacttgactcg
cttgtcaaaacgcaggtaaggacaatgatagctaaagagggcataaggcctgacaacaga
ggacttgaagagataaggccgatatggagcgaagttggcgtgcttccaagaactcacgga
tctgcacttttcacaaggggacagacacaggcgctcactatagctacgctgggagccctc
ggagacgttcagagactcgacggactagatgaaaaagaagaaaaaagatatatgcaccac
tacaatttccctcctttcagcactggtgaggcaaagttcctcagaggacctggaagaaga
gagattggacacggagcccttgcagaaagagcgcttgagcctgtactcccaagcaaggat
gaattcccttatgccataaggcttgtgtctgagatactaagctcgaacggctcatcgtca
atggcgagcgtatgtggaagcacactttcgctgcttgatgccggagtgcccgtaaaggac
atggtttcgggaatagcaatgggtcttataaaagaaggcgacagcatagccatactatcc
gatattcagggaatggaagatttcctgggcgacatggacttcaaggtggcgggaactaaa
aaaggcataactgccatacaaatggacataaagatacacggaatagacagaagcgtgctt
gaaaacgcccttaggcaggcaaaggaaggcagattcttcatacttggcaagatgcaggaa
acaatgactgcgccaagaactgagctttcgccttacgcacctagaataatacaaatgctt
atagatgtagacaagataagggacgtaataggacctggcggtaaggtaataactaagata
gttgaggaaaccggcgtcaagatagatatcgaaaatgacggcagggtgttcataacagct
gagaatctcgaagccggagaaaaggcgaaggccataatagaaaacattgtaaaagtgcct
gaagtaggggaagtttacacaggcaaggttacaaggcttatgaaattcggagtatttgta
gagatacttccaggcaaagagggccttatacacatatccaacatagcgcatgagcgaatc
gagaaggttgaagacgcgctcaatgtgggagacgtggtgcaggtcaagctgatggaaatt
gatgaccagggaagaataaacctttcgagaaaggcacttttagaaaaataa
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