Peptoclostridium acidaminophilum: EAL2_c21730
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Entry
EAL2_c21730 CDS
T03061
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eac
Peptoclostridium acidaminophilum
Pathway
eac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAL2_c21730 (dbpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eac03019
]
EAL2_c21730 (dbpA)
03009 Ribosome biogenesis [BR:
eac03009
]
EAL2_c21730 (dbpA)
Enzymes [BR:
eac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EAL2_c21730 (dbpA)
Messenger RNA biogenesis [BR:
eac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EAL2_c21730 (dbpA)
Ribosome biogenesis [BR:
eac03009
]
Prokaryotic type
rRNA helicases
EAL2_c21730 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHM57454
UniProt:
W8T6T3
LinkDB
All DBs
Position
complement(2189613..2191058)
Genome browser
AA seq
481 aa
AA seq
DB search
MTTINFKDYNIGGELLKAIELLNFKSPTKVQQEVIPAALEGRDITVKSQTGSGKTAAFAI
PICQMVEWEENKPQALVITPTRELAIQVQDDFFNIGRFKRLKVASIYGKSPYRRQERELR
QKTHVVVGTPGRIIDHIERGTLDTSCIKYLVLDEADEMLSMGFIEQIEAVIGSLPKERMT
MLFSATMPADIHSLCSRYMEDPISIEIESKGLTADKIEQERYSVNEADKLELLRDLTIVE
NPDSCIIFCNTKQKVDEVHRGLSRLDYPCDKIHGGMEQEDRLSVMDDFKQGGFRYLVATD
VAARGIDIDNITHVINYDIPQDKEGYVHRIGRTGRASSSGKAMTFVTRYEDKFLNEIHSY
IGREIALKERPENAAVDSSRHEFEKKASASPEIKETKGAQLSKEIMKLHVNAGKKTKMRP
VDIVGTLCNIEGMSAADIGIISILDVSTFVEILNNKGEMVLEKLQKTPIKGRLRNVSRAC
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaatcaattttaaggattacaatataggcggcgaactgctaaaagcaatagag
ctgcttaatttcaagagccctactaaggttcagcaagaggttataccagccgcactggag
ggacgtgacataacggtcaagtcacagactggcagcgggaagacggccgcattcgccatt
ccaatatgccaaatggtggagtgggaggagaacaagccgcaggcgcttgtgattactcct
acaagggagcttgcaatacaggtacaggatgatttcttcaacataggcagattcaaaagg
ctcaaggtggcatcaatatacggaaagtctccatacagaaggcaggagcgggaactaagg
caaaaaacacacgtggttgtagggacgccgggccgaattattgaccatatagaaagagga
acgctcgacacatcatgcatcaaatatctcgtgcttgacgaagcggatgagatgctgagc
atgggcttcatagagcagatagaagctgtaataggcagtctgcctaaagagaggatgaca
atgcttttctcggcaactatgcctgcggacatacactcgctctgcagcagatacatggaa
gatccaatcagcattgagatagaatccaaaggccttacggccgacaagatagagcaggaa
cgatacagcgtgaacgaagctgacaaactcgaactgctaagagaccttactatagttgaa
aatccggacagctgcattatattttgcaatacaaagcagaaggtggacgaggtacatcga
gggctttcaaggcttgattatccttgcgataagatacacggcggaatggagcaggaggac
aggctcagtgtaatggatgatttcaagcagggcggcttcagatatctcgttgccacagat
gtcgcagccagaggtatagacatcgacaacattacgcatgtaatcaactacgacatacct
caggacaaggaaggctatgtccacaggataggaagaacgggcagggcgagcagctccgga
aaggcaatgactttcgtgacccgctacgaagacaagtttttaaatgaaatccacagctat
ataggcagagagatagctttgaaggagaggccagagaatgcagccgtggacagctccagg
catgagtttgaaaagaaagcaagcgcgagccctgaaataaaggagacgaaaggcgcgcag
ctgagcaaagaaattatgaagcttcatgtaaatgcaggcaagaaaacgaagatgaggcct
gtagacattgtaggcacgctttgcaacatagaaggcatgagcgcggcggacataggtata
ataagcatacttgacgtctctacttttgtggagatactaaacaacaagggcgaaatggtg
cttgaaaagctccagaagacacctataaagggcaggctgcgcaacgttagtagagcttgt
agatag
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