Exiguobacterium acetylicum: KKI46_00640
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Entry
KKI46_00640 CDS
T07509
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
eace
Exiguobacterium acetylicum
Pathway
eace03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eace00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KKI46_00640 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eace03021
]
KKI46_00640 (rpoC)
03400 DNA repair and recombination proteins [BR:
eace03400
]
KKI46_00640 (rpoC)
Enzymes [BR:
eace01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KKI46_00640 (rpoC)
Transcription machinery [BR:
eace03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KKI46_00640 (rpoC)
DNA repair and recombination proteins [BR:
eace03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KKI46_00640 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QWB31638
LinkDB
All DBs
Position
115238..118810
Genome browser
AA seq
1190 aa
AA seq
DB search
MQIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWECYCGKYKRIR
YKGIICDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDMSPRALEEII
YFASYVVTDPGESTLEKKQLLSEKEYRAYREKFGRSFTAEMGAEAVRKLLRDVELDKEVA
ALREELRMIQGQRRTRAIKRLEVLDAFRNSGNNPEWMVLEVLPVIPPELRPMVQLDGGRF
ATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGRRGRPVTGPG
NRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKEMALELFKPF
VMKELVSRGIAPNIKSAKRKIERVQPEIWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPT
LVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNILNPKDGKPVV
TPSQDMVLGNYYLTLERENAIGEGKIFSTVNEALIAYQNGYAHFHTRVAIPAGVLKNPTF
TEEQNEKLLITTVGKLIFNEILPTTFPYLNEPTMTNLQEATPDKYFLEKGTDVAAELKNR
PIIDPFKKGFLGNVIAEVFKRFETTETSRMLDRMKNLGFKHSTRAGITVGIADIIVLPDK
QEILVEAQDNVDRVMKSYRRGLITEDERYERVVKSWNDAKDEIQSRLMKSLNRLNPIFMM
SDSGARGNASNFTQLAGMRGLMAAPSGRIIELPIKSSFREGLTVQEYFISTHGARKGLAD
TALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGIRVTALREGTEEIESLYDRLVGRTAF
ENVVHPETGEVLVSTNELIDEDIARVITDAGVDNVEIRTAFTCNTSHGVCKKCYGRNLAT
GNDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELFEARNPKGQA
VISEIDGQVIDFTESRDKRELTVQGLSETRTYTIPFGSRLRVQLGDEVKAGQVFTEGSID
PKELLNVKGVSGVQNYLLQEVQKVYRMQGVEIGDKHVEVMVRQMIRRVRVIESGETSLLP
GSLVDISTFKEACKEALRNGKALASAKPVLLGITKASLETDSFLSAASFQETTRVLTDAA
IKGKSDYLRGLKENVIIGKLVPAGTGMARYRQIDLEVAGEAPVEADSPVE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcggcctcgcttcccccgaaaagatccgttcatggtctttcggggaagtgaaa
aagccggagacgatcaactatcgtacactcaaaccggagaaagacggtttgttctgtgaa
cgtatctttggtccaacgaaagactgggaatgttactgtggtaaatacaaacggatccgc
tataaaggaatcatttgtgaccgctgtggcgttgaagtcacgaagtcgaaagtccgtcgt
gagcgcatgggtcacatcgagctcgcagcaccggtttcgcacatctggtacttcaaagga
attcctagccgtatgggactcgtcctcgacatgtcaccgcgtgcgttagaagagatcatc
tacttcgcgtcgtacgtcgtcacagatccaggcgaatcgacacttgagaagaaacaactc
ctttcagagaaagaataccgtgcctatcgtgagaagttcggtcgttcgttcactgctgaa
atgggtgcggaagcagttcgtaaattgctccgtgacgtagaactcgataaagaagtcgct
gcattacgtgaagagcttcgtatgattcaaggacaacgtcgtactcgtgcgatcaaacgc
cttgaagttctcgatgcgttccgtaactcaggcaacaatccagaatggatggtgcttgaa
gtacttccagtcatcccaccggaacttcgtccgatggttcaactcgatggcggacgtttc
gcaacgtctgacttgaacgacttgtaccgccgcgttatcaaccgtaacaaccgtctcaag
cgtcttcttgaccttggcgctccgaacatcatcgttcagaatgaaaaacggatgcttcaa
gaagcagtcgatgctttgatcgataacggtcgtcgcggtcgtccagtcactggaccaggt
aaccgtccacttaaatcactttcacacatgttgaaagggaaacaaggacgtttccgtcaa
aacttgctcggtaaacgtgtcgactactctggtcgttcggttatcgtcgttggtccaaac
ctgaagatgtatcaatgtggtcttccaaaagaaatggcccttgagctcttcaaaccgttc
gtcatgaaagaactcgtctctcgtggcatcgcaccgaacatcaagagtgcgaaacggaaa
atcgagcgcgttcaacctgaaatctgggatgtcctcgaagaagtcatccgtgagcatccg
gttctcttgaaccgtgcaccgacacttcaccgtctcggtatccaggcgttcgaaccaacg
ctcgtcgaaggacgcgcgattcgccttcacccactcgtatgtacggcttacaacgccgat
ttcgatggtgaccaaatggcggttcacgtaccactttcggcagaagcacaagcagaagct
cgtcttctcatgctcgctgcacaaaacatcttgaacccgaaagacggtaaacctgttgtt
acaccatcgcaggatatggtcctcggtaactactacctcacgctcgagcgcgaaaacgcg
atcggcgaaggtaaaatcttctcgacagtgaacgaagcgctcatcgcttaccaaaacggt
tatgcgcacttccatacacgtgttgcgattccagccggcgttctcaagaacccgacattc
acggaagagcaaaacgagaaattattgattacaacagtcggtaagttgatcttcaacgag
atcctcccaacgacgttcccttacttgaacgaaccaacgatgacgaaccttcaagaagcg
acgccagacaagtacttccttgaaaaaggaacagatgtcgcggcagaactgaagaaccgt
ccgatcattgacccgttcaaaaaaggattccttggaaatgtcatcgcggaagtcttcaaa
cggtttgagacgacagaaacaagccgcatgctcgaccgcatgaaaaacctcggattcaaa
cactcgactcgtgccggtatcacggtagggatcgcggacatcatcgttcttccggacaaa
caagagattcttgttgaagcgcaggacaatgtcgaccgcgtcatgaaatcttaccgtcgt
ggtctcatcacagaagacgagcgctatgagcgcgtcgttaaatcgtggaatgatgcgaag
gatgaaattcagtctcgtctgatgaaatccctcaaccgtctcaacccgatcttcatgatg
agtgactccggtgcccgtggtaacgcgtcgaacttcacgcagctcgctggtatgcgtgga
ctcatggccgctccaagtggacggatcatcgagctcccgatcaaatcatcgttccgtgag
ggtctaacggtacaggaatacttcatctcgacacacggtgcacgtaaaggtcttgccgat
acagccttgaaaacggctgactcaggttacctgactcgtcgtctcgttgacgttgctcaa
gacgtcatcatccgtgaagatgattgtggaacggatcgtggtatccgcgtcacagcactc
cgtgaaggaacggaagagatcgaaagcctctacgaccgcctcgtcggacgtactgcattc
gaaaacgtcgttcacccagaaacaggagaagtcctcgtttcaacgaacgaactcatcgat
gaagacatcgctcgtgtcatcactgatgctggtgtcgataacgttgagatccgtactgcc
ttcacatgtaacacaagccatggtgtctgtaagaaatgttacggacgtaacttggcaaca
ggcaacgacgtcgaagtcggcgaagctgtcggtatcattgcggcacaatcaatcggtgag
ccaggaacgcagcttacaatgcgtaccttccacacaggtggggttgccggggatgatatc
acacaaggtcttccgcgtatccaagagttgttcgaagcgcgtaacccgaaaggtcaagcg
gtcatttcggaaatcgatggtcaagtcatcgacttcacggaatcgcgtgacaaacgtgaa
ttgacggtccaaggactcagcgaaacacgcacatacacgatcccattcggttcgcgtcta
cgtgttcagctcggggacgaagtcaaagccggtcaagtcttcacggaaggttcgatcgat
ccgaaagaactcttgaacgttaaaggtgtatccggcgttcagaactacttgctccaagaa
gttcaaaaagtataccggatgcaaggggttgagatcggtgacaagcacgtcgaggtcatg
gttcgccaaatgatccgtcgcgtacgtgtcatcgagtctggtgagacttcactcttacca
ggttcgctcgtcgatatcagcacgttcaaggaagcttgtaaagaagcgctccgtaacggg
aaagctctcgcttcggcgaaaccagttcttctcggtatcacgaaagcgtcacttgaaaca
gattcattcctatcggctgcgtcgttccaagaaacgactcgtgtccttacggatgcagcg
attaaagggaagagcgactaccttcgcggcttgaaagagaacgtcatcatcggtaagttg
gttccagctggtactgggatggcacgttaccgtcagatcgatctcgaagtagctggcgaa
gcacctgtagaagccgattctccggtagaataa
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integrated database retrieval system
