Exiguobacterium acetylicum: KKI46_06015
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Entry
KKI46_06015 CDS
T07509
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
eace
Exiguobacterium acetylicum
Brite
KEGG Orthology (KO) [BR:
eace00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eace03016
]
KKI46_06015
Enzymes [BR:
eace01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
KKI46_06015
Transfer RNA biogenesis [BR:
eace03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
KKI46_06015
Prokaryotic type
tRNA splicing ligases
KKI46_06015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF3080
Motif
Other DBs
NCBI-ProteinID:
QWB31205
UniProt:
A0ABX8GC56
LinkDB
All DBs
Position
1168644..1169828
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AA seq
394 aa
AA seq
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MKTIQGTYGEAKIFTDNVDDLTIKQVTAMLEEQFATGSRVRIMPDCHAGKGSVIGTTMHV
TDEVVPNLVGVDIGCGMLCTRLAEKGPIDFAELDATIQRLVPSGMSVRQKAHPLSEQVPF
DQVLAPFNETRARLSIGTLGGGNHFIELNQDAADELYLVIHSGSRNLGKTIAEHYQAEAE
TARFQFDADQVIGELKQAGRESEIQATLQQLKATRSMFNKDLASVSGEAMERYLHDLKIA
QRYAALNRQAMTQVIFEAMGWTVADQFDTIHNYIDLDAMILRKGAISAKAGEQAIIPMNM
RDGSLIVVGKGNPDWNYSAPHGAGRIMSRSKAFKTVELDAFEKTMTDVWSSSVVASTRDE
SPFVYKPMDEIIRNTKETVDVVEIIKPLYNFKAK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaattcaaggcacgtatggggaagcaaagattttcacggataacgtcgacgac
ctgacgattaagcaagtcacagccatgctagaggaacaatttgcgacaggtagtcgcgtt
cgaatcatgccggattgccatgctggaaaaggatctgtcatcggaacgacgatgcatgtg
acggacgaggtcgtaccgaatctcgtcggagtcgatattggttgtgggatgttgtgtaca
cgactcgctgaaaagggaccaatcgactttgcagagcttgacgcaacgatccagcgtctc
gttccaagtggcatgtcggtacgtcaaaaagcccatccattatcagaacaggtaccattt
gatcaagtgcttgcaccgttcaacgagacacgggcacgattatcgatcggtacgctcggt
ggaggaaatcacttcatcgaactgaaccaggacgcagcagacgagctttatcttgtgatt
cattccggaagccgaaatcttgggaaaacgatcgctgaacattatcaggcagaagcggaa
acggcacgcttccaatttgatgcggatcaagtcatcggggaattaaagcaagcggggcgt
gagtcggagattcaagcgactttacagcaattgaaagcaacacgctctatgtttaacaaa
gacttagcatctgtttccggagaagcgatggagcgctacctgcatgatctcaagattgcg
caacgctacgccgcgctgaaccgtcaggcgatgactcaagttatttttgaagcgatgggg
tggacggttgcggatcagttcgatacgatccacaactacatcgatcttgacgcgatgatt
ctacgaaaaggtgccatctctgcgaaagcgggtgagcaggcaatcattccgatgaacatg
cgtgacggctctttgatcgtcgtcggaaaaggaaatcccgattggaactattccgcacca
catggagcaggacgtatcatgtcacgatcaaaagcattcaaaacagttgaactggatgca
tttgaaaagacgatgaccgatgtctggtcaagttctgtcgtcgcatcgacgcgtgacgaa
tcaccgttcgtctacaaaccgatggacgaaatcatccgaaacacaaaagaaacagtcgat
gtcgttgagatcattaaaccgctgtacaactttaaggcaaaatga
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