Ensifer adhaerens OV14: OV14_2221
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Entry
OV14_2221 CDS
T03054
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ead
Ensifer adhaerens OV14
Brite
KEGG Orthology (KO) [BR:
ead00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ead03016
]
OV14_2221 (rnd)
Enzymes [BR:
ead01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OV14_2221 (rnd)
Transfer RNA biogenesis [BR:
ead03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OV14_2221 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHK43939
LinkDB
All DBs
Position
1:complement(2158296..2159324)
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AA seq
342 aa
AA seq
DB search
MANPDMAVIVDPMAKGIDLTPFFALMANPDVIKVFHAARQDIEIIFHLGNLIPHPIFDTQ
VAAMVCGFGDSVSYDQLVNRIKGEQIDKSSRFTDWSRRPLTEKQLDYALADVTHLRDIYQ
YLNAQLERESRSLWLSEEMAILEARDTYDLHPDDAWQRLKMRVKKPIELAVLQKVAAWRE
REARNRNVPRGRIIKDDAIYEVAQQQPKDTEALARLRTIPKGWERSSAGAALIEAVNEAL
AIPKTDLPRLPRQSHTPEGAAAATEMLKVLLKLIAEKQGVAAKIIANSEDLDKIAAEGEN
ADVGALKGWRRELFGDTALKLINGEVALRFVDKKIEAMEIGD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacccggatatggccgtcatcgtcgacccgatggccaagggcatcgatctcacg
ccgttcttcgcgttgatggccaaccccgacgtgatcaaggtcttccatgccgcgcgccag
gatatcgagatcattttccatctcggcaatctgattccgcatccgatcttcgacacccag
gttgcggccatggtctgcggcttcggcgacagcgtctcctatgaccagctcgtcaaccgc
atcaagggcgagcagatcgacaagtcctcgcgcttcaccgattggagccggcggccgctg
accgagaaacagctcgattacgcgctggccgatgtcacgcatctgcgcgacatctatcag
tacctgaatgcgcagctcgagcgcgaaagccgctcgctatggctttccgaggaaatggcg
atcctcgaagcccgcgatacctacgacctgcacccggacgatgcctggcagcgcctgaaa
atgcgcgtcaagaagccgatcgagcttgccgtgctgcagaaggtcgcagcctggcgtgaa
cgcgaggcacgcaaccgcaacgttccgcgcgggcgtatcatcaaggacgatgcgatctat
gaagtcgcgcagcagcagccgaaggacaccgaggcgctggcgcggctgcgaaccattccg
aagggctgggaacgatcgagcgccggggctgcgctgatcgaggcggtcaacgaagcgctc
gccatccccaagaccgacctgccacggctgccgcggcagagccatacacctgaaggcgca
gccgccgccaccgaaatgctgaaggtgctgttgaagctgatcgccgagaagcagggcgtg
gctgccaagatcatcgccaacagcgaggatctcgacaagatcgccgccgagggcgagaac
gccgatgtcggcgcgctcaaggggtggcggcgcgagctgttcggcgatacggcactgaaa
ttgatcaatggtgaagtggctctgcgcttcgtcgacaagaagatcgaagcgatggaaatc
ggtgactga
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