Ensifer adhaerens OV14: OV14_3753
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Entry
OV14_3753 CDS
T03054
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ead
Ensifer adhaerens OV14
Pathway
ead02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ead00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OV14_3753 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ead03021
]
OV14_3753 (rpoD)
Transcription machinery [BR:
ead03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OV14_3753 (rpoD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
DUF5856
Phage_DsbA
Relaxase_C
DUF4350_C
DUF3106
CorA
Motif
Other DBs
NCBI-ProteinID:
AHK45012
LinkDB
All DBs
Position
1:complement(3601296..3603353)
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AA seq
685 aa
AA seq
DB search
MATKVKENEEADVEREGAPDGPLLDLSDDAVKKMIKAAKKRGYVTMDELNSVLPSEEVTS
EQIEDTMAMLSDMGINVIEDEEAEEAAGGSSDDESSDDDNDGEGGELAPSGGTALAATKK
KEPTDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQALIIW
RDELNEGQTLLREIIDLETTYSGPEAKAAPQFQSPEKIEADRKAAEEKEKTRKVRAANDD
DITNVGGDVMPSEEEEEDDDESNLSLAAMEAELRPQVMETLDIIAETYKKLRKLQDQQVE
ARLAATGTLSPAQERRYKELKDELIKAVKSLSLNQNRVDSLVEQLYDISKRLMQNEGRLL
RLAESYGVKRDSFLEQYSGAELDPNWMKSISNLAGKGWKEFAKSENQTIRDIRQEIQNLA
TETGISIAEFRRIVSMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEG
NIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSR
QMLHEIGREPTPEELAEKLAMPLEKVRKVLKIAKEPISLETPVGDEEDSHLGDFIEDKNA
LLPIDAAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIR
QIEAKALRKLKHPSRSRKLRSFLDS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaagtcaaagaaaacgaagaagctgacgttgaacgcgaaggcgctccggac
ggcccgcttctcgatctttccgatgacgctgtcaagaagatgatcaaggccgccaagaag
cgcggctatgtgacgatggacgaattgaactccgtcctgccgtccgaagaagtcacctcc
gagcagatcgaagacacgatggcgatgctctccgacatgggcatcaacgtcatcgaagac
gaggaagctgaggaagccgccggcggcagcagcgacgacgaaagcagcgacgacgacaac
gacggcgaaggcggcgaactggccccttccggcggcacggcgcttgcggcgacgaagaag
aaagagccgaccgacagaaccgatgacccggtgcgcatgtatctgcgcgaaatgggttcg
gtagagcttctgtcgcgcgagggcgaaatcgcgattgccaagcgcatcgaggctggccgc
gagacgatgatcgctggtctctgtgagagcccgttgacgttccaggcgctgatcatctgg
cgcgacgaactcaacgaaggccagacgctgctgcgcgagatcatcgatctcgaaaccacc
tattccggtcccgaggcaaaggctgctccgcagttccagagcccggaaaagatcgaggct
gaccgcaaggctgccgaggaaaaggaaaagacccgcaaggttcgcgccgccaacgacgac
gacatcaccaatgtcggcggcgatgtcatgccgagcgaggaggaagaggaagacgacgac
gagtcgaacctctcgctcgccgccatggaagcggaactgcgcccgcaggtcatggaaacc
ctcgacatcatcgccgagacctacaagaagctgcgcaagctgcaggaccagcaggtggaa
gcccgcctggctgccactggcacgctgtcgcctgcccaggagcgccgctacaaggagctc
aaggacgagctgatcaaggcggtcaagtcgctgtcgctcaaccagaaccgcgtcgacagc
ctcgtcgagcagctctacgacatctccaagcgcctgatgcagaacgaaggccgcctgttg
cgcctggccgaatcctacggcgtcaagcgtgactcgttcctcgagcagtattccggcgcc
gaactcgacccgaactggatgaagtcgatcagcaacctggccggcaagggctggaaggaa
ttcgccaagagcgaaaaccagacgatccgcgacatccgccaggagatccagaaccttgcg
accgaaaccggcatctcgatcgccgaattccgccgcatcgtctcgatggtgcagaagggc
gagcgcgaagcgcgcatcgccaagaaggaaatggtcgaagcgaacctgcgcctcgtcatc
tccatcgccaagaagtacaccaaccgcggcctgcagttcctcgatctcattcaggaaggc
aacatcggcctgatgaaggcggtcgacaagttcgaataccgtcgcggttacaagttctcg
acctatgcgacctggtggatccgtcaggcgatcacccgttcgatcgccgaccaggcccgc
acgatccgcattccggtgcacatgatcgaaacgatcaacaagatcgttcgcacgtcgcgc
cagatgctgcatgaaatcggtcgcgaaccgacgccggaagaattggccgagaagctcgcc
atgccgctcgaaaaggtccgcaaggtcctgaagatcgccaaggagccgatctcgctcgaa
accccggtgggcgacgaagaggattcgcatctcggcgatttcatcgaggacaagaatgcg
ctgctgccgatcgatgccgccatccaggcgaacctgcgcgaaacgacgacccgcgttctt
gcctcgctgacgccgcgcgaagagcgcgtcctgcgcatgcgcttcggcatcggcatgaac
accgaccatacgctcgaagaagtcggccagcagttctcggttacccgcgaacgtatccgt
cagatcgaggcgaaggcgctgcgcaagctcaagcatccgagccgctcgcgcaagctgcgc
tcgttcctcgacagctaa
DBGET
integrated database retrieval system
