Klebsiella aerogenes KCTC 2190: EAE_09355
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Entry
EAE_09355 CDS
T01529
Name
(GenBank) exoribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
eae
Klebsiella aerogenes KCTC 2190
Pathway
eae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAE_09355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eae03019
]
EAE_09355
03016 Transfer RNA biogenesis [BR:
eae03016
]
EAE_09355
Enzymes [BR:
eae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EAE_09355
Messenger RNA biogenesis [BR:
eae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EAE_09355
Transfer RNA biogenesis [BR:
eae03016
]
Prokaryotic type
tRNA degradation factors
EAE_09355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
WHD_RNase_R
RNase_II_C_S1
TFIIE_beta
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
AEG96789
UniProt:
A0A0H3FN16
LinkDB
All DBs
Position
1979319..1981760
Genome browser
AA seq
813 aa
AA seq
DB search
MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAIELNIEGEEQTEALRRRLR
AMERDGQLVFTRRQCYALPERLDLVKGVVIGHRDGYGFLRVEGRKDDLYLSSEQMKMCIH
GDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTDAGVGFVVPDDSRLSFDILIPP
EEIMGARMGYVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDMALRTHEIPYVWPPA
VEKQVSGLKEQVPEEAKAGRVDLRSLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA
DVSYYVRPGTPLDGEARSRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTIS
SKGRLTGFKFYEAVMSSHARLTYTKVWHMLQGDQELREHYAPLVKHIEELHNLYKVLDGA
REERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAQEP
ALFRIHDKPSTEAITAFRTVLAELGLELPGGNKPEPRDYAELLTSIADRPDAEMLQTMLL
RSMKQAVYDPENRGHFGLALQSYAHFTSPIRRYPDLSLHRAIKYLLAKEQGHKGNSTETG
GWHYSMEEMLQLGEHCSMTERRADEATREVSDWLKCDFMQDQVGNTFSGVIASVTGFGFF
VRLNDLFIDGLVHVSSLDNDYYRFDQVGQRLIGESGGQTYRLGDRVEVRVEAVNMDERKI
DFSLISSERGPRNVGKTVREKAKKGAPGKNGGGRRRQVGKQVNFEPDSAFRKEKEKAKAK
PKGEKKAKKPSAKTQKIAAATKAKRAAKKKNAE
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagatccattccaggagcgcgaagctgagaagtacgcgaatccaatcccgagc
cgggaatttatcctcgaacatttaaccaaacgcgaaaaaccggccagccgtgatgagctg
gcgattgagttaaatatcgagggcgaagaacaaaccgaagcgctacgtcgtcgcctgcgt
gcaatggaacgcgatggccagttggtgtttactcgccgtcagtgctatgcgctgccggaa
cgtctcgatttagtcaaaggtgtcgttattggccaccgcgacggctacggctttttacgc
gtcgaagggcgtaaagacgacctgtatctttcatctgagcagatgaaaatgtgtatccat
ggcgatcaggtgctggcccagccgttgggcgccgatcgtaaggggcgtcgcgaagcgcgc
atcgttcgcgtgctggtgccgaaaaccagccagatcgtcggccgttatttcaccgatgcc
ggtgtaggcttcgtggtgccggatgacagccgtcttagcttcgatatcctgatcccgcct
gaagagatcatgggcgcgcgtatgggctacgtggtggtggtcgagctgacccagcgtcca
acccgccgtaccaaagcggtcggcaaaatagttgaagtgctgggcgacaacatgggcacc
ggcatggccgttgatatggcgctgcgtacccatgagatcccttacgtctggccgccggcg
gtggaaaaacaggtctccggcctcaaagagcaagtgccagaagaggcgaaagccgggcgc
gtcgatttgcgctctctgccgctggtcactattgacggcgaagatgcccgcgacttcgat
gacgcggtgtattgcgagaaaaaacgcggtggcggctggcgactgtgggtggctatcgcc
gacgtgagctactacgtgcgccccggtacgccgctggacggcgaagcgcgcagccgcggg
acgtcagtctacttcccttcgcaggtcgtaccgatgctgccagaggtgctgtccaacggc
ctgtgttcgctgaacccacaggtcgatcgcctgtgtatggtctgcgaaatgacgatctcg
tcaaaaggccgcctgaccggctttaaattctatgaagcggtgatgagctctcacgcccgc
ctgacctataccaaggtgtggcatatgctgcagggcgatcaggagctacgcgagcactat
gcgccgctggtgaagcatattgaagagctgcataacctctataaggtgctggatggcgcc
cgtgaagagcgcggcggtatctcatttgaaagtgaagaagctaaattcatcttcaacgcc
gagcgtcgtatcgagcgtattgaacagactcagcgtaacgatgcgcacaagctgattgaa
gagtgcatgatcctggcgaacatctccgcggcgcgtttcgttgagaaagcgcaggagccg
gcgctgttccgtattcacgataagccaagcaccgaagcgattaccgccttccgtaccgtg
ctggcggaactggggctggaactaccgggcggcaacaagccggagccgcgcgattacgcc
gagctgttgacttccatcgccgatcgcccggatgcggaaatgctgcagacgatgctgctg
cgttctatgaagcaggcggtctacgatccggaaaaccgcggccacttcggcctggcgctg
cagtcatacgcccacttcacctcgccgatccgtcgttatcctgacctgtcgctgcatcgc
gctattaagtatttactggcgaaagagcagggacataaaggcaatagcaccgagaccggc
ggctggcactacagcatggaagagatgctgcagctgggcgagcactgctcgatgaccgag
cgccgcgccgatgaagcaacgcgtgaagtgtcagactggctgaagtgcgacttcatgcag
gatcaggtgggcaacaccttctccggcgtgatcgccagcgtcaccggctttggcttcttc
gtccgcctgaacgatctgtttatcgatggtctggtacatgtctcctcgctggataatgac
tactatcgcttcgaccaggtcgggcagcgcctgatcggcgagtccggcggccagacttac
cgcctgggtgaccgcgtggaagtacgcgtcgaagcggtcaatatggatgagcgtaagatt
gatttcagcctgatttccagtgaacgcggcccgcgtaatgtcggcaaaaccgtacgcgaa
aaagcgaagaagggcgcgccgggtaaaaacggcggcggccgtcgtcgccaggttggcaag
caggtaaacttcgagccggatagcgccttccgtaaggaaaaagagaaagctaaagccaaa
ccgaaaggtgaaaagaaagcgaaaaagccgtcggcgaaaacgcagaaaatcgccgcggca
accaaagccaagcgcgcggcaaaaaagaagaacgccgagtga
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