Klebsiella aerogenes KCTC 2190: EAE_16335
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Entry
EAE_16335 CDS
T01529
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
eae
Klebsiella aerogenes KCTC 2190
Pathway
eae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAE_16335 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eae03019
]
EAE_16335 (rne)
03009 Ribosome biogenesis [BR:
eae03009
]
EAE_16335 (rne)
Enzymes [BR:
eae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
EAE_16335 (rne)
Messenger RNA biogenesis [BR:
eae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EAE_16335 (rne)
Ribosome biogenesis [BR:
eae03009
]
Prokaryotic type
rRNA processing factors
EAE_16335 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
Motif
Other DBs
NCBI-ProteinID:
AEG98178
UniProt:
A0A0H3FRA0
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All DBs
Position
complement(3525592..3528816)
Genome browser
AA seq
1074 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLQLPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS
LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIETRQSDIRVIIVPNDEMQ
TPHYSVLRVRKGEETSTLSYLLPKLHEEEMAMPSDEEPAERKRREEPALAAFVMPDAPPA
PVQEETAAAPTAAKAAAAPAAKVATPAQPGLLSRFFGALKNIFSGAEEAKPAEVKAEQKT
EEKPERQQERRKPRSNNRRDRNDRRDNRDNRDNRDNRDNRGENTEGRESRESREENRRNR
RDKQSQNAELRESRQNAGDESDKGKSRDEQQQPRRERNRRRNDDKRQAQQEAKTQTREEP
VVQQETEQEERVQSMPRRKPRQLAQKVRFESAETEQVVEAVAEQQAESTTPRTELAKVDL
PAVVETAAEQDENGDARESNGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLAIAC
ASPELASGKAWIRYPIARAHDQQQEELPVQETANVEPIITPVVAETIAPVVVAETVAAET
VAPAVASEPTAEATVVEAPVVEETAVVEETAIVAESVAPQAEVSEPAEPVVEETETAPAP
ATEETVTAQPTIAEEETTVVEETTVAAVEEAAPVVEPTPVISTAPVVKAQPATTATRHAT
APMTRAPAPEYVPEAPRQSDWVRPPFAFEGKGSAGGHSATHQATAEATRPQPVE
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaacgcaactcagcaggaagagttgcgcgtcgctcttgttgat
gggcagcgcctgtacgacctggatatcgaaagccccgggcacgagcagaaaaaagcgaac
atctacaaaggcaaaatcactcgtattgaacctagccttgaagccgcgtttgtcgattac
ggcgctgagcgtcatggtttcctccccctcaaagaaattgcccgcgaatacttcccagcc
aattacagcgctcatggccgccctaacattaaggacgttctgcgcgaaggtcaggaagtc
attgttcagattgataaagaagagcgcggtaataaaggcgccgcgctgaccacctttatc
agcctggcaggcagctacctggtactgatgccgaacaaccctcgcgccggcggcatttcg
cgccgtatcgaaggtgacgatcgtaccgagctgaaagaagcgctggcgagccttcagctg
ccggacggcatgggtcttatcgtgcgtaccgcgggcgttggcaaatccgctgaagcgctg
cagtgggatctgagcttccgcctgaagcactgggaagcgattcagaaagccgctgagagc
cgccctgctccgttcctgatccaccaggaaagtaacgttatcgtgcgtgccttccgcgac
tatctgcgccaggacatcggcgaaatcctgatcgataatccgaaagtgcttgagctggcg
cgccagcatatcgccgccctcggtcgtccggatttcagcagcaaaatcaaactgtacacc
ggtgaaatcccgctgttcagccactaccaaattgaatcccagattgaatccgcgttccag
cgtgaagtgcgtctgccgtccggtggttctatcgttatcgatagcaccgaagcgctgacc
gctatcgacatcaactccgctcgcgcgacccgcggcggcgatatcgaagaaacggcgttc
aacactaacctcgaagcggctgacgaaatcgcgcgccagttgcgtctgcgcgaccttggc
ggcctgatcgttatcgacttcatcgatatgaccccggtccgccaccagcgtgcggttgaa
aaccgcctgcgtgaagccgtccgccaggaccgcgcgcgtatccagatcagccatatctcg
cgcttcggcctgctggagatgtcccgccagcgtctgagcccgtcgctgggcgaatccagc
caccacgtgtgcccacgctgtagcggcaccggtaccgtgcgtgacaacgaatcgctgtcg
ctctctatcctgcgcctgattgaagaagaagcgctgaaagagaacaccaaagaagtccac
gcgatcgttccggtacctatcgcttcttacctgcttaacgaaaaacgtgccgcagtcagc
gcgattgaaacccgccagagcgacattcgcgtcatcatcgtccctaacgatgagatgcaa
accccgcattactccgtactgcgcgtgcgtaaaggcgaagaaacctcaacgctgagctat
ttgctgccgaaactgcacgaagaagagatggcgatgccgtctgacgaagaaccggctgaa
cgcaaacgccgcgaagagccagcgctggctgctttcgtgatgccggatgcgccgcctgcg
ccggtacaggaagaaaccgcagccgcgccgaccgcagcgaaagccgccgctgctccggca
gcgaaggtagcaacgcctgcccagcctggtctgctgtcccgcttcttcggcgcgttgaaa
aacatcttctccggcgcagaagaagctaaaccggctgaagtcaaagccgagcaaaaaact
gaagagaaacctgagcgtcagcaagagcgccgtaaaccgcgttctaataatcgccgcgac
cgtaacgaccgtcgtgataaccgcgataatcgtgacaaccgtgataatcgtgataatcgc
ggagaaaacacagaaggtcgcgaatctcgtgaatcacgcgaggagaaccgccgtaaccgt
cgtgacaaacaatcacagaacgctgaactgcgcgaatctcgccaaaacgcgggcgatgag
tctgataaaggcaagtcacgcgatgagcaacagcaaccgcgccgtgaacgcaaccgccgt
cgtaatgatgacaagcgtcaggcacagcaggaagcgaaaactcagacccgcgaagaaccg
gtagtacagcaggaaaccgagcaggaagagcgcgttcagagcatgccgcgtcgtaagccg
cgtcagctggcgcagaaagtccgctttgaatccgcagaaaccgagcaggttgtcgaagcc
gttgctgagcagcaggcggaatccactacgccgcgtacggaactggcaaaagtcgatctg
ccggccgtcgttgaaactgccgctgagcaggatgaaaacggcgacgctcgtgaatctaac
ggtatgccgcgtcgctctcgtcgctctccgcgccacctgcgcgtaagcggccaacgtcgc
cgtcgttaccgcgatgagcgttatccgacccagtcgccgatgccgctggccatcgcctgc
gcgtcgcctgagctggcgtcaggtaaagcgtggatccgctatccaattgcccgtgcgcat
gatcagcagcaggaagagttaccggtacaggaaaccgccaacgttgagcctatcattacg
ccagtcgtcgcggagactatcgctccggttgtcgttgcggaaaccgtcgcagctgaaact
gtcgcaccggcagtggccagcgaaccgaccgcagaagcgaccgtagttgaagctccggtc
gtcgaagaaacggcggtggttgaagagaccgcaattgttgcggaaagcgttgcgccgcag
gcagaagtcagtgagccagcagagccggtagtcgaagaaactgagaccgcacctgctcca
gctactgaagaaaccgtcactgcgcagccaacgattgccgaagaagaaaccactgttgtc
gaagaaacgaccgttgccgccgttgaagaagccgcgccggttgttgaaccgacgccggtc
atcagcaccgcgccagtggtgaaagcgcaaccggcgaccaccgctactcgccatgcgacc
gcgccgatgacccgcgcaccggctccggaatacgtgccggaagcgccgcgccaaagcgat
tgggttcgtcctccgtttgcctttgagggtaaagggtctgcaggcggccatagcgccact
catcaagccacggcggaagctacccgtccgcagcctgtagagtaa
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