Klebsiella aerogenes KCTC 2190: EAE_20440
Help
Entry
EAE_20440 CDS
T01529
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
eae
Klebsiella aerogenes KCTC 2190
Brite
KEGG Orthology (KO) [BR:
eae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eae03019
]
EAE_20440
Enzymes [BR:
eae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EAE_20440
Messenger RNA biogenesis [BR:
eae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EAE_20440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
nSTAND3
T2SSE
NACHT
ResIII
PhoH
AAA_16
SLFN-g3_helicase
AAA_23
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AEG98995
UniProt:
A0A0H3FTC9
LinkDB
All DBs
Position
complement(4378020..4381865)
Genome browser
AA seq
1281 aa
AA seq
DB search
MLRDKSRYSRRLHGAKKVKNPDAQQAILHEMAREIEQAAGKVLLREAARPAITYPENLPV
SQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRGLKGLIGHTQPRRLAARTVA
NRIAEELQSEPGGCIGYKVRFSDHVSENTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA
HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNHAPIIEVSGRTYPVEVR
YRPIVEEADDSERDQLQAIFDAVDELGRESTGDILIFMSGEREIRDTAEALNKLNLRHTE
VLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
VQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQATAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV
NLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQLRQVVKELGLPINSEPAEY
REIHTALLTGLLSHIGMKDSDKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRL
WGRIAARIEPEWVEPVAQHLIKRSYSEPHWERSQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRDNLKLRAEIEELEHKSRRRDILVDDETMFEFY
DQRISHDVISARHFDKWWKQASRETPDLLNFEKSMLIKEGAEQVSKLDYPNFWHQGNLKL
RLSYQFEPGADADGVTVHIPLPLLNQVEEAGFEWQIPGLRRELVIALIKSLPKPVRRNFV
PAPNYAEAFLGRASPLALPLLDSLERELRKMTGVTIDRESWQWDQVPDHLKITFRVVDDK
NKKLQEGRSLQVLKDALKGKVQETLSAVADDGIEQSGLHIWSFGTLAESYEQKRGNYKVK
AWPALVDERDSVAIKLFDNPQEQQQAMWRGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF
NPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFSKLHDKVRAELNDTVVDIAKQVEQI
LTAVFNINKRLKGRVDMTMALGLSDIKAQMAGLVYRGFVTGNGFRRLGDTLRYLQAIEKR
LEKLAIDPHRDRAQMLKVESVQQAWQQWLNKLPPNRRDDDDVQEIRWMIEELRVSFFAQQ
LGTPYPISDKRVLQAMEQITP
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgataaatcgcgctatagccgccgcctgcatggcgcaaagaaggttaaaaat
cctgatgcccagcaggccattctgcacgagatggcgcgggagatagaacaggcagcaggg
aaagtcctgctacgcgaagccgcgcgtccggcaatcacctatccggaaaacctgccggtt
agccagaaaaaacaagagattctcgaggcggtgcgcgatcaccaggtggtgatcgtcgcc
ggtgaaaccggttcaggtaaaaccactcagctacccaaaatctgcatggagctggggcgc
ggcctgaaaggcctgattggccacacccagccgcgtcgactggcggcgcgaaccgtcgct
aaccgtattgccgaagagcttcagagcgagccgggcggctgtatcggttataaagtccgc
ttcagcgaccacgtcagcgaaaacaccatggttaagctgatgaccgacggtatcctgctg
gcggaaatccagcaggatcgcctgctgatgcagtatgacaccatcattattgatgaggcg
cacgagcgcagtctgaacattgattttctgctgggctatctgaaagagctcctgccgcgc
cgcccggacctgaaaatcatcattacctcggcaaccatcgacccggaacgtttctcgcgc
cactttaatcatgcgccgattatcgaagtttccgggcggacttacccggtggaagtacgt
tatcgtcccattgttgaagaggcggacgatagcgaacgcgatcagctacaggcgattttt
gatgccgtcgatgaactggggcgtgaaagcaccggcgatatcctgatctttatgagcggc
gagcgggaaatccgcgataccgccgaggcgttgaataagctcaatctgcgtcacaccgaa
gtgctgccgctgtatgctcgtttatccaatagtgagcaaaaccgggtcttccagtcccat
agcgggcggcgtattgtcctggcaaccaacgttgccgaaacctcgttgacggttccgggc
atcaaatacgttatcgatccgggtaccgctcgcatcagtcgctacagctaccgtacaaaa
gtgcagcgcctgcctatcgagccagtatcacaggcctccgctaatcagcgtaaaggccgt
tgcggacgtgtgtctgaaggcatctgtattcgtctttactcggaagatgatttcctgtcg
cggccggaatttaccgacccggaaattctgcgtaccaatctggcctcggtcattctgcaa
atgaccgctctggggctgggcgatatcgccgcgtttccgtttgtcgaagcgccggataag
cgcaacatccaggatggcgttcgtctgctggaagagcttggcgccatcaccaccgatgag
caggcaacggcctataagctgaccccgctgggccgccagctcagccagctaccggtggat
ccgcgtctggcacggatggtgctggaagcgcagaaacatggctgcgtgcgtgaagcgatg
atcatcacttccgcgctgtcgattcaggatccgcgcgagcgccccatggacaagcagcag
gcatccgatgaaaagcatcgtcgcttccacgataaagagtctgatttccttgcgtttgtc
aatttgtggaactatctcggcgaacaacaaaaggcgctctcttcgaatcagttccgccgc
cagtgccgggtggatttcctcaactatttacgcgtgcgtgaatggcaggatatttacacc
caactgcgccaggtagtgaaagaactcggcctgccgatcaacagcgagccagcggagtac
cgtgaaattcataccgcgctgctgaccggtttgttgtcgcatatcgggatgaaggactcc
gataaacaggagtataccggcgcccgtaatgcgcggttctctatcttccccggctctggt
ctattcaagaagccgccgaagtggacgatggttgcggaactggtggagaccagccgcctg
tgggggcgcattgccgcccgcattgagccggagtgggtcgagccggtggcccagcatctg
attaaacgttcatacagtgaaccgcactgggagcggtcgcagggcgcggtaatggcgaca
gaaaaggtcaccgtctacggtctgccaatcgtcgccgcgcgtaaggtcaactatagccag
attgacccggcgctgtgtcgtgagctgttcatccgccacgcgctggtagagggcgactgg
cagacgcggcatgctttcttccgcgataacctgaagctgcgcgctgaaatcgaagagctg
gagcataagtcgcgccgtcgcgacatcctggtggatgacgagacgatgttcgagttttac
gaccagcgcattagccacgatgttatctccgctcgccactttgataagtggtggaagcag
gccagccgtgaaacgccagacttgctcaattttgaaaagagcatgctgattaaagagggg
gcggagcaggtcagtaaactggactacccgaatttctggcatcagggcaatcttaaactg
cgtcttagctatcagtttgaacctggtgcggatgctgatggcgtaacggttcatattccg
ctgccgctgctcaaccaggtagaggaagccgggtttgaatggcagatccctggcctgcgt
cgcgagctggtcatcgcattaatcaaatcgttgccgaaacccgttcggcgtaatttcgtc
ccggcgcctaattacgccgaggcatttttaggccgcgcgtcgccgctggcgttgccgcta
ctggattcgctggagcgtgagctgcgtaaaatgaccggcgtgaccatcgaccgcgaatcc
tggcagtgggatcaggtgcccgatcacctgaaaatcactttccgggtggtggatgacaaa
aataagaaactgcaggaaggacgctctctgcaggtcttaaaagacgcgctcaaaggtaaa
gttcaggagacgttatcggcggtggccgacgatggtattgaacagagcgggctgcatatc
tggagtttcggcaccctggcggagagttacgaacagaagcgcggtaattataaggtgaaa
gcctggccggcgctggtggacgagcgtgacagcgttgccatcaaactgtttgataatcca
caggaacagcagcaggcgatgtggcgtggtctgcgccgtttactgttgctcaatattccg
tcgccgattaagtatctgcacgagaaactgcccaacaaagccaaattgggactctatttc
aacccttatggcaaggtgctggatttgattgacgactgcatctcctgtggtgttgacaag
cttatcgatgaagccggcggcccggtgtggaccgaagagggctttagtaaactgcacgat
aaagtgcgcgccgaactgaacgacacggtggtcgatatcgcgaagcaggtcgagcagatc
ctgacggcggtatttaacatcaataagcgtctgaaagggcgggtagatatgacgatggcc
ctggggctgtcggatattaaagcgcagatggcgggtctggtttatcgcggctttgttacc
ggcaacggtttccgccgcctcggcgatacgctgcgttatctgcaggcaattgaaaagcgt
cttgagaaactggcaatcgacccgcatcgtgaccgcgcgcagatgctaaaagtcgagagc
gtgcaacaggcgtggcagcagtggttgaataagctgccgccgaatcgccgcgatgacgac
gacgtacaggagatccgctggatgatcgaagagctgcgcgtcagcttctttgctcagcag
ttgggtaccccgtatccgatctcggacaaacgcgtgttgcaggcgatggagcaaattacg
ccgtag
DBGET
integrated database retrieval system
