Eurytemora affinis: 111694746
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Entry
111694746 CDS
T07296
Name
(RefSeq) general transcription factor IIH subunit 2-like protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
eaf
Eurytemora affinis
Pathway
eaf03022
Basal transcription factors
eaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111694746
09124 Replication and repair
03420 Nucleotide excision repair
111694746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaf03021
]
111694746
03400 DNA repair and recombination proteins [BR:
eaf03400
]
111694746
Transcription machinery [BR:
eaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111694746
DNA repair and recombination proteins [BR:
eaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111694746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
ANCHR-like_BBOX
IBR
IBR_1
C1_2
VWA_3
zf-HIT
zf-AN1
Motif
Other DBs
NCBI-GeneID:
111694746
NCBI-ProteinID:
XP_023319518
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MDGTGEDGNEYRWEGGYEKTWESIQEDKDGMLDVSVQDIIQKARRRRLAERQGKTKLGMM
RHLYIILDMSESMKAQDIKPTRWLCCLKLLEKFIEEYFYLNPISQIGLVTSSNKRAEKVS
DMTGNPRKHIEALKSLKDKPCSGEPSLQNSLDLVIQSLKNMPSHTSREVLILMGSLTTCD
PGDINKTIQEAHDLKIKCSVINLAAEVRIYRELVTRTGGMHAVILDDHHLRDLLTEHLNP
PPSLIAQQASLIRMGFPSHAGREDGDGALGMCLCHMDTGGEKITSSGYICPQCQARYCEL
PVECRGCGLTLVSAPHLARSYHHLFPLLIFKEVEPRNVPADRSWCNGCGQLFKPDKDKAV
YQCPQCDQLYCVECDLYIHETLHSCPACCSRPTPPSNQTNGSMMNGVS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggacggaacgggtgaagatggaaatgagtacagatgggagggagggtatgaaaaaacg
tgggaaagtattcaagaagataaggatggtatgctcgatgtatctgtacaggatatcatc
cagaaggctcggcggagaagattggctgaaaggcaaggcaaaactaagcttggcatgatg
aggcatctgtacattatcttagatatgtcggaaagcatgaaagctcaggatataaaacca
accaggtggttgtgttgcctgaaacttttggagaagtttatcgaagaatatttttatttg
aatcctataagtcaaatcggtttagttacatcaagtaataaaagagctgagaaggtgtca
gatatgacaggcaacccgcgaaaacatatagaggctttaaagagcttaaaagataaacct
tgctctggagaaccatcccttcagaattctttggaccttgtgatacaatctttgaaaaat
atgccctcacacacaagcagggaagtattaattttgatgggcagcctaactacttgtgac
ccgggagatattaataaaacaattcaagaggcacatgacctaaaaataaaatgttctgtg
ataaaccttgctgcagaagtaagaatttatcgtgagctagtaaccaggaccggaggaatg
catgcggttattttagacgatcatcatctgcgagacctgctcactgagcacctaaaccct
ccgcctagtttaatagcacaacaagccagtctgatcagaatggggtttccaagtcatgca
gggagagaagatggggatggggcccttggaatgtgtttgtgtcacatggatacaggagga
gaaaaaattacatcatcaggatacatttgccctcaatgtcaagcaagatactgtgaacta
cctgttgagtgtagaggttgtggcttaactctagtctcagcacctcacctggccagatct
tatcatcatttattccctctccttattttcaaggaagttgaaccccgaaatgttcctgca
gatagaagctggtgcaatggatgtggtcaactgttcaaaccagataaagacaaggctgtt
tatcagtgtcctcaatgcgatcagttgtactgtgttgagtgtgatctatatattcatgaa
acccttcacagttgtccagcctgctgctctagacctactccgccttcaaaccaaacaaat
ggttcaatgatgaatggggtttcttag
DBGET
integrated database retrieval system
