Eurytemora affinis: 111695097
Help
Entry
111695097 CDS
T07296
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
eaf
Eurytemora affinis
Pathway
eaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111695097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111695097
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111695097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_10
TPR_8
TPR_1
TPR_12
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
111695097
NCBI-ProteinID:
XP_023320052
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MSDDDRGGVSGKEKDLAAEALVHFNNNEYSSCLASLEQLEILRPSDVKLAHNKIVAQCRA
EGSPVQLTEVQQQLEGLAKTAGVDVSGVSKDDEGEWGVLTYNLAVCKFQQRHILQASQLA
SRLLPTATTKPMFAKRSLFLNAELSLALRQPEQAAKYANMLQPLVEGNDEECSRLMILKA
RCQVLNRQIKSLKKELKSVSLPGNVGLTCEFVRSHIEYHCGNFRKSIKMLNSAVQAAGNR
VFPHYYNNLGCIHQNMKKPNLAVYYFKNALERLESNQGGTSIPNQADGGKESTSWIAQSQ
VLYNISLALLHAKRPHIAFDLLLDVVASHYLDPSVWFHLAECCIQHNQPDNDKHFSGTDR
AEQVSSGGVGAGAMHKIIASNPSNTVSNTPGTVPVLSLDFAYVCLKNAESLLPEVEGDIE
NWGFCCGIGYIGNPMSRTDIEQLKISILSAKSYVALAVGDFVQAGRYAESLLELPNLPGA
YKMLAHLYAAESLILQDKISAAIKHLDPGNICDVNVNFGNDSRTSVGWSPSDLSEARSYI
QYNLAVGFALREEWEKADCLVGPLYNRNSEITVQVLLLNLYIALRQGDSERAVQLVRDRC
PAADYSQDHQDFSNFPK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatgatcgtggcggagtttccggaaaagagaaggatttggcggcggaggct
ttggttcattttaacaataacgagtacagctcctgtctcgcctccttggagcagctagag
attctccgtccgtccgacgtgaagctggctcataataagatagttgctcaatgtcgcgct
gaggggagtcctgtgcagctgacggaggttcagcagcaattggagggattggccaaaaca
gcaggagtagatgtgtctggagtaagtaaagatgatgaaggagagtggggagttctaact
tacaacctggctgtttgtaaattccagcagagacatattcttcaggcgtcccagcttgct
tcccgtcttctccccacagcaacaactaaaccaatgtttgctaaacgaagtctgtttctc
aacgcagaactttctcttgctctcagacaacctgaacaggcagcaaaatatgctaatatg
cttcaacctctagtagaaggaaacgacgaggaatgttcaagactgatgattttaaaagca
agatgtcaagtattgaatcgtcaaattaaatctttaaagaaagaattaaagtctgtgagt
cttccaggaaatgttggtttaacctgcgagtttgtccgatctcacatagaataccattgc
ggaaactttaggaaatcaatcaagatgctgaattcagcagttcaagctgctggcaacagg
gtcttcccgcactattataataatctaggctgtatccatcagaatatgaagaaacccaac
ctagcagtttactatttcaagaatgccctggaacggttggaatccaaccagggcggaact
tctataccaaaccaagctgacggtggcaaggagtcaactagttggatagctcagtctcag
gttctttataacatcagccttgccctacttcatgctaaacgaccacacatagcgttcgat
ttgttattagacgtggtagcgtctcattatctggatccaagtgtctggtttcatctggca
gagtgttgtatccagcataatcaaccagacaatgataaacatttcagtgggactgataga
gcagagcaggtgtctagcggaggggttggagctggagccatgcacaagattatagcatct
aatccaagcaatactgtttctaatacacctggtaccgttcctgtcctttccttggacttt
gcttacgtttgcctaaagaacgcggaatcattgctacctgaggttgaaggggatattgag
aactggggattctgttgtggaataggatatataggaaaccctatgagcagaacggatata
gaacagctaaagatatcaatcctctccgctaaatcctacgttgccctagctgtcggagat
tttgtgcaagcgggacgatacgcggagtccttgctagagcttcctaacctccccggagct
tacaagatgttagcgcatctttacgcggcagagtccttgattttacaggataaaataagc
gctgccattaaacatttagatccgggaaatatttgtgatgtaaacgtgaactttggtaat
gattctcgaacctcagttggctggagtccgagtgatctatcggaggctcgctcgtatatt
caatacaacctggctgtagggttcgcgctccgagaggagtgggagaaagcggattgtttg
gttggacccttgtataacagaaacagcgagataactgttcaagttctactcctaaaccta
tatattgcgctaagacagggagattcagaacgtgctgttcagcttgtcagggatagatgt
ccagccgcagattattcacaagatcatcaagatttctcaaattttcccaaataa
DBGET
integrated database retrieval system
