KEGG   Eurytemora carolleeae: 111695253
Entry
111695253         CDS       T07296                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
eaf  Eurytemora carolleeae
Pathway
eaf03013  Nucleocytoplasmic transport
eaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111695253
  09122 Translation
   03013 Nucleocytoplasmic transport
    111695253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eaf03019]
    111695253
   03041 Spliceosome [BR:eaf03041]
    111695253
Messenger RNA biogenesis [BR:eaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     111695253
Spliceosome [BR:eaf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111695253
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_WDR5 Beta-prop_EML WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_THOC3 WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 Beta-prop_IP5PC_F Nucleoporin_N Beta-prop_ACSF4 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR75_1st DUF8038 Beta-prop_EIPR1 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 111695253
NCBI-ProteinID: XP_023320259
LinkDB
Position
Unknown
AA seq 326 aa
MRDISLLPQYTTVTCQTMCPGGSFYSACTESGLISVWEVDSLLSNSSPKPLLSFAAHGEE
PIYSLTSTENFLISGGLGEVRGWCWNGFKTKTEKPAWSFHVGATGRSTQINWIDLDRQAG
SSGRVYVGCSDGNIYIYDLETRRLDKVLTGHTQFVHCVAGADGSGGVSLISGGEDGDVKL
WDTRKSNPLIHSFCPYLESELNRPECGRFISTVCTAGDWLVCGGGPAASLWNLSTRIMSS
RLPPDHGAVFASNLIEDQICIAGQNPMLHTSNFGGETCSAEKVSSGCIYSIVAQEEKGII
LTAGSSSIIDIFSLKNQEIIKSFSIK
NT seq 981 nt   +upstreamnt  +downstreamnt
atgcgggatatatccttgttacctcagtacaccacggtaacatgccagaccatgtgcccc
ggtggatcgttctactcggcctgcacggagtccgggttgatcagtgtctgggaggttgat
tcccttctctccaactcctcacctaaacctcttctatcctttgcagcacatggagaagaa
cccatatactctcttacaagcacggaaaattttctgatatctggagggttaggtgaggtt
cggggttggtgttggaatgggtttaagactaagacggagaaaccggcctggagtttccat
gttggagctactggccgttcaactcagataaactggatagatctggacagacaggctgga
tcatctggccgtgtatatgtgggatgcagtgacggaaacatatatatttatgatctggag
acaagaagattagacaaggttctcaccggacacacacagtttgtacactgtgtagccggg
gcggacggtagcggcggagtgagtctgatcagcggcggcgaggacggggacgtaaagctc
tgggatactaggaaatccaacccgctgatacactccttctgtccctacctggagtcggag
ctgaaccgtcctgagtgtggacggtttatctctactgtgtgtactgctggagactggttg
gtgtgtggtggaggtcctgctgcatcactctggaacctatctaccaggattatgagcagc
aggttaccaccagaccacggagctgtttttgcatcaaaccttatagaagatcaaatatgt
attgctggacagaacccgatgttacacacgagcaatttcggtggcgagacatgttctgcg
gagaaagtgagctctggatgtatctacagtatagtagcgcaggaggagaaaggaattata
cttactgctggatcctcatcaatcatagatatcttctcattgaagaaccaggaaataatc
aaatctttttctataaaataa

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