Eurytemora affinis: 111695587
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Entry
111695587 CDS
T07296
Name
(RefSeq) DNA mismatch repair protein Msh2-like isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
eaf
Eurytemora affinis
Pathway
eaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111695587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eaf03400
]
111695587
DNA repair and recombination proteins [BR:
eaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111695587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
111695587
NCBI-ProteinID:
XP_023320726
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MEPEGVDDTLDSVHVDTLLKAWKKLGEKSSTTVHIFERNDFFYFFEKDGELAAKHAFGSV
TATKTMGKTNPVSFCVMNHANFESTLRFILLVKHFRVEIFKFVAAKGGKLATYELEVRAS
PGNISAVEHVLYGESEVVGDCNYLVGVRLQGGADQLTVGIAAVDTSLNQIQVCDFTDGIT
FPNLESVLVQLNPREVVIPQSEHPGLKKIKQILERNRILVTPKPSTEFTPLVESEIKRLF
NPKTMIGSLSENPVSSSACSAVLKYLGLNTESGDGNLFRIDVLKPSEYMRLDQRAVHGLN
LFDEPGHVGSSVFNILNKTRTPGGSRLLQSWIKQPLIHVDAIKERLDLVECFVKNSDARQ
TLYEDHLRKMPDFQRISTKFQSKRASLQDMYKVYIAVNKLPGLKDSLDSFGEEQSLVQEN
FSKDIADAWKDFEKFLQLVETTLDLDQVRSGQFLIKPEFDEALGYLRQELDTVDSRIQKT
LTNCGSELGLEPGKVLKLEHSSIHGYYFRLTMKEEKSVRNDRSYTIIEANKSGVKFRNNK
LEQLNDEHSDLSVKYENQQSAIVSEMIGIASGYADVMNHLGMIISKLDVIVSLSLAAVCA
PIPYVKPEILPPTHRKLYFSQLRHPILELQDQISFIANDVEFEEGTSTFHIITGPNMGGK
STYIRSVGVAVLMGQIGSFVPADHATFSVVDSVMVRIGASDCQVKGISTFMAEMLETSTI
LQSAIPNSLILIDELGRGTSTYDGYGIAVAVSEHIAKEIGCFTLFTTHYTELTQLAKEID
TVKNYHVTAMVSEEKLTLLYQILPGVCDKSFGIHVAKLANFPTDVIDDANQRLVRLESGV
MA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggagccagagggagttgacgataccttggatagtgttcatgttgatactcttctcaaa
gcgtggaagaaactaggtgagaagagctctaccacggttcatatcttcgagagaaacgat
ttcttttacttcttcgagaaagacggagaattggcggcgaaacatgctttcggttccgtg
actgcaaccaaaactatggggaagaccaacccggtttccttctgtgtgatgaaccacgca
aacttcgagtctaccctgcgctttattctactcgtgaaacacttcagagttgagatattc
aagttcgtcgcagctaagggaggaaaattagcaacctacgagcttgaggttcgagcttct
ccgggcaatatttctgctgtggaacatgtactatacggagaatctgaggtggttggagat
tgtaactatctggttggggtcaggcttcagggtggggctgatcagctaactgttggtatt
gctgcagtagatactagtctaaaccagatccaggtttgtgatttcactgatggaatcacc
tttcctaaccttgagtctgttctggtccagctgaaccctagagaggtagttataccacag
tcagagcatccagggcttaagaagatcaagcagatcctggagagaaaccgaatacttgtc
actcctaagccaagcaccgagttcacacccctggttgagtcggagattaagcgtctgttt
aatcctaagacaatgattggttccctgtctgagaaccctgtgtccagtagtgcctgctct
gcagttctcaagtacctgggacttaacacagagtcaggggatggaaatctgtttaggatc
gatgtgttgaaaccctctgagtacatgagattggaccaacgagcagtccacggtctgaat
ctgttcgatgaacctgggcatgtcggatcttcagtcttcaatattctaaacaaaaccaga
acccctggaggttccaggctactccagtcttggattaaacaacccctgatccacgttgat
gcgatcaaagagcgactggatctggtagaatgctttgttaagaactccgacgccagacaa
actctttatgaagaccatctacggaaaatgccggatttccagagaatttcaactaaattt
cagagcaaacgagcatctttgcaggatatgtacaaagtttatattgctgtgaacaaactc
cctggactgaaggatagtctggattctttcggcgaggaacaatctcttgttcaggaaaac
ttctccaaggacatagctgatgcatggaaagattttgagaagtttctccagcttgttgaa
actaccctggacctggatcaggtgcggagtggacagtttctcattaaacctgagttcgat
gaggctctgggatacctgagacaagagttggatactgttgattcaaggattcagaaaact
ctgaccaactgtggtagtgagctgggactggaacctggcaaagttttgaagcttgagcac
tcgtccattcacgggtattactttaggctcaccatgaaggaggagaagtctgttaggaac
gacagatcctacaccatcatcgaggcgaacaagtccggtgttaagttccgaaataataaa
cttgagcagttgaacgacgagcactctgacctttccgtgaagtatgagaaccagcagagc
gccattgtgtccgagatgatcgggattgcctccgggtacgcggatgtaatgaatcatctt
ggaatgataatatctaaacttgatgtgatagtttccctctccttggctgctgtttgtgct
ccgataccgtatgttaaacctgagattctacctccgacccatagaaaactttacttctcc
cagctccggcatcctatccttgagcttcaggatcagatcagtttcattgcgaacgacgtg
gagttcgaggaaggaacctcaaccttccatatcattacaggacctaatatgggcgggaaa
tctacctatatccggtctgttggagtagctgtgctaatgggtcagattggtagttttgtc
cctgccgatcatgcaaccttctccgtcgttgactccgtgatggttaggattggagcctca
gactgccaggtcaagggaatctcaacttttatggcggagatgttagagacctcaacgatc
ctgcagagcgctattccgaacagtttgatcctgatagacgagctgggtcggggaacctca
acctacgacggatatgggattgcagtggcggtgtcagagcacattgctaaggaaattgga
tgcttcacgttgttcactacacactacacagagcttacacagctggccaaagaaatagat
acagtgaaaaactaccacgtgacagctatggtatctgaggaaaagcttactctactttat
cagatcctacccggagtatgtgataaaagttttggtatacatgttgccaagcttgctaat
tttcctacagatgtgatcgacgacgcgaaccagagactagtcagactggaaagtggagtc
atggcttag
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