Eurytemora carolleeae: 111695784
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Entry
111695784 CDS
T07296
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
eaf
Eurytemora carolleeae
Pathway
eaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111695784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eaf03041
]
111695784
03009 Ribosome biogenesis [BR:
eaf03009
]
111695784
Enzymes [BR:
eaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111695784
Spliceosome [BR:
eaf03041
]
Complex A
U1 snRNP components
U1 related factors
111695784
Complex B
111695784
Ribosome biogenesis [BR:
eaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
111695784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
Cas3-like_C_2
SLFN-g3_helicase
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
111695784
NCBI-ProteinID:
XP_023320994
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MNKLWQLAIRPMVRQTWQNGHIRELSSGFDSVGSFGFRGFATSSSFKTEDERSEIEQYMR
EHSIRVEGNDAPDPILSFDGTSIPKNILNHVMKQFDKPTPIQSQALPIALEGRNMVGIGQ
TGSGKTLAFLLPALAHIHKARETRHSSDYRGPVALILTPTRELAQQIQEVSELYRRSSNV
MNVCCIGGDSRYRQLERYDRGPELMIATPGRLNDFIQSGDMNISGVEYVVLDEADRMLDM
GFEPQIRNVLKAIQGDKQVLMFSATWPTDVKELAEDFLGTYVFMNIGSTELSANKNITQK
VVVCDKSSKHGIFLDTLQEIKDQKTLIFAETKATVDRLEHIIRKSGIRAMGIHGDKSQSA
RSNVIKRFKSGDCKIMIATDVAARGLDISNVEYVINYDFPNDIENYVHRIGRTGRSDKKG
TSITFMGDDDANQAKKLVNILKEANQIVPEELEELVHQARGNKIQKRRYGAPGGGFQGYK
SYKNRDDSYRRKPQYNNRRDDWNDDSTQYRSSRNRRDDSDPFY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactatggcagcttgcgatacggccgatggtcagacaaacttggcaaaatggc
catattcgggaactgagttcaggatttgattcagtcggaagttttggtttcagaggtttt
gccacaagttcgtcgtttaagactgaagatgagcggagtgaaattgagcagtacatgcga
gaacacagtataagggtagagggaaatgatgcacccgatcctattctcagctttgatggg
acctcaataccaaagaatattctaaatcatgttatgaagcagtttgataaaccaactcca
attcaatcacaggctttaccgattgcattggagggacgaaatatggttggtattggacaa
acaggttcggggaaaacacttgcatttctccttcctgctctagcacatattcacaaggct
cgagagacaagacacagttcagattacagaggtcctgtagctctaatccttacaccaacc
agagaactcgctcaacagatacaggaggtgtcagagctatacaggagatcttcaaatgtc
atgaacgtatgctgtataggtggagactcaaggtatcgacagctagagagatatgatcga
ggtcctgagctgatgatagcaacacctggacgattaaatgattttatacaatccggcgac
atgaatatcagtggtgttgagtatgtggtactagacgaggctgaccggatgctggatatg
ggatttgaacctcagattagaaatgttcttaaagccattcaaggagataaacaagtctta
atgttcagtgctacatggcctacagatgtcaaggagttggccgaagattttcttggaact
tacgtgttcatgaatatcgggtctacagagctgagtgcaaacaagaatataacccaaaag
gtggttgtgtgtgacaagagcagtaaacatggtatatttctcgacacactgcaagagatt
aaagatcagaaaactttaatatttgccgagacgaaagctactgtcgacagattagaacat
ataatacggaaaagtggtatccgtgcaatgggaatacatggagacaaaagccagtctgca
cgttcaaatgtgataaaaaggttcaagagcggtgattgtaaaataatgattgcaactgat
gttgctgctcgaggactagatatctcaaatgttgaatatgtcataaattatgattttccg
aacgatattgaaaattatgttcacagaatcggccgaacaggacgatcggataaaaaggga
acttccataacatttatgggtgatgatgatgctaatcaggcgaagaaactagtcaatatt
ctgaaagaagcaaaccaaatagttcctgaggaactagaggagctagtccaccaggctaga
gggaataagatacagaaacgtagatacggagctcctggaggaggatttcaaggatataaa
tcttacaagaatagagatgattcttacagacggaaacctcagtataataacaggagagat
gactggaatgatgattcaacacagtacaggtcatcaagaaatcgacgcgacgactccgat
cctttctattaa
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