Eurytemora affinis: 111696131
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Entry
111696131 CDS
T07296
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
eaf
Eurytemora affinis
Pathway
eaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111696131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eaf03041
]
111696131
03009 Ribosome biogenesis [BR:
eaf03009
]
111696131
Enzymes [BR:
eaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111696131
Spliceosome [BR:
eaf03041
]
Complex A
U1 snRNP components
U1 related factors
111696131
Complex B
111696131
Ribosome biogenesis [BR:
eaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
111696131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
REC1
Motif
Other DBs
NCBI-GeneID:
111696131
NCBI-ProteinID:
XP_023321449
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MSRYESRDRGYGGSRGGDSRGGGGRSSYGGGGGGYGGGYGGGGGGYGGGGGGSMKGKQPG
GNLRAVNWKNHDLKPFTKDFYNPAPHSKNADVRTVEKFRNEHEIVIMKGLERTPNPIFEF
ADGNFPDYINKEVQRAGFTRPTPIQAQGFAIALQGHDFVGIAQTGSGKTLGFMLPGIIHC
NNQDYLARGDGPIVLVLAPTRELAQQIQEVAQKFGQSSRIKNTCVFGGAPKGPQLRDLEN
GCEIVIATPGRLIDFLEMGKINLRRVTYLCLDEADRMLDMGFEPQIRKILEQIRPDRQVL
MWSATWPKEVKQLAHDFLHKDYIHINIGSQDLSANHNILQIVDVCDEHQKESKLAKLLEE
IGSDASAKIIIFVETKRKADELTRLMRRDGWPAMCIHGDKQQKERDWVLGEFKTGSTTIL
VATDVAARGLDVDDIKFVINYDYPNNSEDYIHRIGRTGRKGNTGTSYTLFTPTNGSKARD
LISVLTEAKQVVNPRLQELVGAGGFRGRDRYGGGGRGGGRGGGGGRYGGGGGGGGRW
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtccagatatgagagcagagacaggggctacggaggtagtcggggcggagatagtagg
ggtgggggtggaaggagtagttatggaggcggaggcggtgggtatggtggtggatatgga
ggtggtggtggcggatacggaggaggcggtggtggaagtatgaaaggaaagcagcctgga
ggaaatctccgagctgttaactggaagaatcatgatcttaaacccttcacaaaggatttc
tacaacccagctccccacagcaagaacgctgacgttaggaccgtcgagaagttcaggaat
gaacacgagatcgtgatcatgaagggtttggagagaacccctaaccctatcttcgagttt
gccgacggaaacttccccgactacatcaacaaagaagttcaacgtgctggatttacccga
cctactcctatccaggctcaaggattcgctattgccctccagggtcatgattttgtcggg
attgcgcagaccggatccgggaaaactcttggatttatgctgcctggtattattcactgt
aataaccaggattatctggcccgaggagatggacctattgtacttgtccttgcaccaact
agggagctcgcacagcagatccaggaggttgcccagaagtttggtcaaagcagtaggatt
aagaatacttgcgtcttcggaggagccccgaagggacctcagctgagggacctagagaac
ggttgcgagattgttatagctacacccggtagattgatcgattttctggaaatgggcaag
atcaacttgagaagagttacctacctgtgtctggacgaagctgatagaatgttggatatg
ggtttcgaaccccagatcaggaagattcttgaacagatccgacctgaccgacaagttctc
atgtggtccgctacctggcccaaggaggttaaacagcttgcccatgacttcttgcacaag
gattacattcatatcaacatcggatcccaggacctgagcgctaaccacaacattttacag
attgtcgacgtttgtgatgagcaccagaaagagtctaagctagctaagctccttgaagag
attggttcagacgcttcggccaagattatcatctttgtcgagaccaagcgtaaggccgac
gagttgacgcgtctgatgagacgtgatggatggccggccatgtgtattcacggagataaa
cagcagaaggagagagattgggttcttggagagtttaaaaccggaagtacaaccatcttg
gtcgctacagatgtcgctgctcgtggtttggatgtcgacgatattaagttcgttattaac
tacgattaccccaacaacagcgaagactacattcacagaataggacgtaccggcaggaaa
ggaaacaccggaacctcttacaccttgttcactccaaccaatggatctaaagctagagat
ctaatcagcgtactaaccgaagccaagcaggttgtaaacccacgacttcaagaattagtc
ggagctggaggattcagaggtagagacagatatggtggaggaggtcgtggtggcggacga
ggcggtggaggtggccgatatggtggtggcggaggaggaggtggaagatggtaa
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