Eurytemora affinis: 111696598
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Entry
111696598 CDS
T07296
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
eaf
Eurytemora affinis
Pathway
eaf03040
Spliceosome
eaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111696598
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111696598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eaf03041
]
111696598
04121 Ubiquitin system [BR:
eaf04121
]
111696598
03400 DNA repair and recombination proteins [BR:
eaf03400
]
111696598
Enzymes [BR:
eaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111696598
Spliceosome [BR:
eaf03041
]
Complex B
Other components
Prp19 complex
111696598
Complex C
Prp19-CDC5 complex
111696598
Ubiquitin system [BR:
eaf04121
]
Ubiquitin ligases (E3)
U-box type E3
111696598
DNA repair and recombination proteins [BR:
eaf03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
111696598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EIPR1
U-box
Beta-prop_IFT122_1st
Beta-prop_Vps41
eIF2A
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_DCAF12
Cytochrom_D1
zf-Nse
ATG16
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
111696598
NCBI-ProteinID:
XP_023322006
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MASLICAISSEVPESPVVSPVSGQVYERRLIEKYIDENGTDPISKEPLSKEQLVEIKVSP
LVKPKPPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIAR
LNKEVTAAREALATLKPQAGGATPLHTPAHAPATPVHAETPVHVQKPVEESGMTGEILEK
LQEKATVLTQERKRRGRTVPQELMSAESISSFVTQSSHPGLHSASVPGILALDIFAKDTS
KILTGGADKNATVFNKDLEQVVAVLKGHTKKVNHVVYHPTEDTAITGSHDATVRVWNVPT
AQTMHLLKVHEGPITGLSLHATGDYILTTSTDQCWAFSDIRSGRLVSRVNDQSGGVALTC
AQFHPDGLLVGTGTADANIKIWDLKEGTNVANFPGHTGQISALAFSENGYYLATAADDSC
VKLWDLRKLKNFKTLQLDEGYEVRDINFDTSGTYLAVAGTDVRVYLCKQWTELLVMQDHT
ATATGVRFGDNSRFIASTSMDRTLKIYGPA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcttatctgcgcaatatccagtgaggtcccggagagtccggtagtgtctcca
gtatcaggtcaagtttatgagaggagactgatagaaaagtatatagatgagaacggaaca
gatccaatctctaaggaaccattgagtaaagagcagttggttgagataaaggtttctcct
ctagtgaaacctaaacctcccagtgcaactagtataccagccattctcaaatccctacag
gatgaatgggatgctgttatgctacacagtttcacgctccgccaacagcttcaaactgcg
cgccaagaactgtcccacgcgctataccagcacgatgccgcctgcagagttattgcgcgt
ctcaacaaggaggttactgctgcgcgtgaagcgttggctactctcaaaccccaggctggt
ggtgctactccactacacactccggcacatgctcctgccacacctgtacatgctgaaact
ccagttcatgtgcagaaaccggttgaagaatcaggcatgactggtgagatcctagagaag
ttgcaggagaaggcaactgttctaacacaggagaggaagagaagaggaagaactgttcct
caggaattaatgtctgcggaaagtatctccagctttgttactcaatcctctcatcctggt
ctacactctgcttcagttccaggtatcctggctctggatatatttgctaaggatactagc
aagatattgactggaggagcggataagaatgctaccgtcttcaacaaggatcttgaacag
gttgttgctgtattgaaaggacataccaagaaagttaaccatgttgtatatcatcctact
gaggatactgctatcactggttctcatgatgctacagtcagagtttggaacgttccgacc
gcacagacaatgcatctactgaaggttcatgaaggacctatcactgggttatcccttcac
gctacaggtgattacatcctgacaacctctacagatcaatgctgggcgttctctgacatt
aggtctggtcgtctagtatccagggttaacgaccagagtggtggagtagcgctgacttgc
gcccagttccatcctgacggtcttcttgtgggaacaggaactgctgatgctaacatcaag
atttgggatctcaaggagggaactaatgttgccaatttccctggacatactggacagatc
tctgctcttgcattctctgagaacggttactacctggccactgctgcagatgacagttgt
gtcaagctttgggatttgcgtaagttgaagaacttcaagactctgcagctggatgaagga
tatgaggttcgtgacatcaacttcgatacctccggtacatacctagctgtggctggtact
gatgttagggtatacttatgtaaacagtggacggagttgctagttatgcaagatcataca
gccaccgctacaggagtcagatttggagacaactccaggtttatcgcatctacgtctatg
gaccgaactctgaagatttatggacctgcttaa
DBGET
integrated database retrieval system
