Eurytemora affinis: 111698004
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Entry
111698004 CDS
T07296
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
eaf
Eurytemora affinis
Pathway
eaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111698004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111698004
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111698004
mRNA degradation factors
5'-3' decay
Decapping complex
111698004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_TEP1_2nd
WDR55
Motif
Other DBs
NCBI-GeneID:
111698004
NCBI-ProteinID:
XP_023323980
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MDGQTFFQTILRSKSSNAPIQFSGSDETNSFPVKGSEVSIVGSAGDHEVGSSKLHIRDII
KFSWEHRYYPGQLVCHHISGEYIAYAIITPGISQGMVRVMNRNTEERTLIKGMKGAVVDV
SFAHVKEDVVVGCVDEQGNLFVYRISESSSGLQHERVLCVLRDKPLHTEHRLIWCPYMKV
CEEDEDDEDDVESSARLLVLTHGDDCEVWHVDTVVEKHGTGPLRPEDVTDGLLKIPEAGG
IITDAAFSPDGNALATASKDGQVKFFQVYMKGEEDPRCLHQWSPHGGKPVSSLLFLDDHS
EYQPNVAFWKYVITGCDHNSELKIWSCETWSCLQTIKFQSHGADSTEPRLKIALDSTARY
LLLSDIDRNLLYVLSVEFPSESLNEDASVVSVSEFPTPAPLLSFCCISAGKKQVAMGEDG
VTVQENGGSVGSKEKTVIKLCFVQTKHLQECSIIFDDAAKAALPKSFPVAPVPVRVPGEM
NGDGFPSPLNPVLASSPKENPNSSSDDLAEAASKINLISTNKFKPLSSLPPPDIVKKEEV
TIELDNDDDDDGSEYDDGVVPTLEKVSQEKDFVSGNSSPSREVATILSTDERRFEPESPA
DNTIQESPSPDFHSTKINLNTSGTIFPNPPSVTLATAMTGSLAKMVPVPLTLDVPVANSQ
PLDIVVKDLQKEIYNLRHEISGLNRTEQIAAQIEAQLATRLDAAVNRTISVSLAKMEQNM
KKQEEIMINFMAKSITSKCDQILSIELKRNVAETVNRALEPLKARIDSQIGHKLSNADQV
VRESVYKIVSNPGFQDSISKNVSKSLQPVIAESYREVLQANLPGMERMMKQILSNMNETF
LAGTKEYTAELRGRLEASEVAQRDEISPYLRDIMKSLGNLSASQSKLSNQVSEINTRNEK
ELPKSIAKMIRSEVRAALLDQVSVSPGPIKPNNLHADIKFIKEMASTGNYNEAFKKALSL
NDLSMVMLACHSVNPGQMFGQETCPLNQSVILSLIQQLSCNLQEKTELKLAYLEEAVLHL
DKNNSITKAHAPSMLNLLKASIQTYTKETPNSKHARNFKTLEMAAAGFIHEIQ
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggacggacagacattttttcagacaattttacgaagcaaatcttcaaatgcacccata
caattcagtggaagtgacgaaactaacagttttccagtgaaaggaagtgaggtttccatt
gttggaagtgctggtgaccatgaggttggatcttctaaactacatatcagagatattatt
aaattcagctgggagcacagatactatcctggacagctggtttgccatcatatatccgga
gagtatattgcctacgctatcattactccgggtataagccagggtatggtgagagttatg
aacagaaacacagaagaacgaactctcatcaagggaatgaagggcgccgtggtggacgtg
agcttcgcgcacgtgaaggaggacgtggtggtgggttgtgtagatgagcaggggaacctg
tttgtttacaggatcagtgagtcctcctcaggtcttcaacatgaacgagttctctgtgtt
ctccgggataaacctcttcatacagagcatagactgatctggtgtccgtatatgaaagta
tgtgaagaggacgaggatgatgaagatgatgtagagagctctgctcgtcttctcgtcctc
acacacggagacgactgtgaggtgtggcacgttgatacagttgtggaaaaacatggaacc
ggacctctcagaccagaggatgtaactgacggattattaaaaattcccgaagctggaggc
atcataacagacgcggcattttctcctgatgggaacgctcttgctactgcatccaaggac
ggccaagtcaagttcttccaggtttacatgaaaggggaagaagatccacggtgtttacac
caatggtctcctcatggtggaaaaccggtttctagtcttctcttcctggacgaccactca
gagtatcaacccaacgtggcgttctggaaatatgtcattaccggctgtgatcataacagt
gaacttaagatctggtcctgtgaaacttggagctgtcttcagacaatcaagtttcagtcc
catggggcggattcaacagaacctagactcaagatagctctggattctactgccaggtat
ctcctgctctctgatattgacagaaacctgctctatgttctctcggttgagttcccttct
gaatctctaaacgaagatgcatctgtagtgtcagtctccgagttccctacacccgctcct
ctcctctcattctgctgcatctctgctgggaaaaagcaggttgctatgggtgaggatggg
gttacagtacaagagaatggaggatctgtgggcagtaaggagaaaactgtaatcaaactc
tgctttgttcaaaccaaacatctccaggagtgttcaatcatcttcgacgacgctgccaaa
gcagctcttcccaaatccttccctgttgctccagtacctgttcgagtacccggagagatg
aacggagacggtttcccttctcctctgaaccctgtcctggcaagtagtcctaaggagaat
cccaattctagcagtgacgatctcgctgaagccgcgagcaaaataaatctcatctcaacc
aacaagtttaaacccctctcctcccttccacctcctgacattgtaaagaaagaagaagtt
accattgaactagacaatgatgacgacgatgacggatctgaatatgacgacggtgttgtc
ccaacacttgaaaaggtgtctcaagaaaaggattttgtctccggtaactcaagtcctagc
cgagaggttgccactatcctctctacagatgagagaaggtttgagcctgaatctcccgcc
gacaacacaatacaagaatctccatctcctgacttccactctaccaagataaacttgaat
acaagtggaacaatatttcctaatcctccctctgtaaccctcgccactgctatgacaggc
tcactggccaagatggtccctgtacccctcacccttgacgtccctgtagccaattctcag
cccctagatattgttgtaaaggatctacaaaaagaaatatataatctacgccacgagatc
tccggtttaaacagaacagaacaaatagctgcacagatagaagctcaactagcaaccagg
cttgatgctgccgtcaacaggactatatccgtcagtctagctaagatggagcagaacatg
aagaagcaggaggagataatgatcaacttcatggctaaatctatcacatcgaaatgtgat
caaattctgagtattgagctgaagcgcaatgttgccgagacagtaaaccgtgctctggaa
cctctcaaggcgaggattgactctcagattggacacaagctttctaacgcagatcaggtg
gttcgagagagtgtttacaagatcgtgagtaatcccggctttcaagattctatctctaag
aatgtctccaagtccctccagcctgtgattgctgaaagctaccgtgaggtgctccaggct
aacctaccaggaatggagagaatgatgaaacagattctctctaacatgaacgaaactttc
ctggccggaactaaggagtatactgccgagctccggggtagactggaagcatcagaggtt
gctcagagagacgaaatctcaccgtatctcagggatatcatgaagagtcttggtaatctt
tcagccagtcagagtaaactcagtaaccaggtttctgaaataaatactcgaaatgagaag
gagttacctaaaagtattgcaaagatgatccgtagtgaggttcgagctgctttattggat
caggtttccgtgtctccgggacctatcaaacccaacaatcttcatgctgatattaaattt
ataaaggagatggcgagcacaggaaactacaacgaggcctttaagaaagcgctgagcttg
aacgatctgtccatggttatgctggcctgtcattccgtcaaccccgggcaaatgttcggt
caagagacctgtcctctcaaccaatcggtcattctctctcttattcaacagcttagttgc
aacctacaggagaaaaccgagctgaagctggcgtacctggaggaggcagttcttcatcta
gataaaaacaactctattaccaaggctcacgccccctccatgctgaacctactgaaggcc
tccatccagacctacaccaaggagaccccaaacagcaagcacgccaggaacttcaagacc
ttggagatggcagctgcgggatttattcatgagatccagtag
DBGET
integrated database retrieval system
