Eurytemora carolleeae: 111698584
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Entry
111698584 CDS
T07296
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
eaf
Eurytemora carolleeae
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eaf04147
]
111698584
00535 Proteoglycans [BR:
eaf00535
]
111698584
00536 Glycosaminoglycan binding proteins [BR:
eaf00536
]
111698584
Exosome [BR:
eaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111698584
Proteoglycans [BR:
eaf00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
111698584
Glycosaminoglycan binding proteins [BR:
eaf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111698584
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
111698584
NCBI-ProteinID:
XP_023324720
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MMVRKKNLERIVQGILLLSVFNFSSHKELDLLQAISVPFDDPKHVYFAEGLHGLHAFGLR
AGSDLRTPHSLIFPPVMFENFAILATIRPADSQGGFLFSVVSPFDYIVSLGLSITASSSL
GKQTASLYLSNVGKMKSKPLAEFSIPSLPLSWTAVALKVQASMVTLFINCQEVQTIAVAR
PQTVKFDPASSLFIGQGGGRHMTPWEGVIQELRVSPNPDNAEDYCLESTEVIMIDGEKKS
GPPLSVHHVGQGVQGPKGDRGPMGPRGPPGQSVRGAPGLPGPPGIPGVPGATGPLREHQE
FVVGECGCNESIIERSIVRLTDVLPKGDKGDSGKEGQPGLSGLQGPPGPEGAQGSRGIKG
DRGSRGEPGLTGAQGVPGDKGESGQDGEPGRNGEVGPPGPPGPPGFINGYDPAWSPRSRM
MQDSVLVGRQGTSENIKQSGSPGSKGEKGDTGKSGEHGRKGSTGQKGEKGYEGKKGERGS
QGELGATGPPGNKGDVGPGGTPGVPGPTGAPGVSGSKGDTGEPGPPGSILHLNTTILSGL
KLKPGEKGERGLPGLRGRKGDNGIPGMPGLKGEPGPLPVLNMTALKGPRGERGRRGKRGR
PGPPGTPGPPAPPTIPDYFDAFDIPSNPELRPEIPLQVVQGLLHEDSFSVPISGSHGKRE
SEKSPDISHCSSPLSVATVDKLSRHFSICPPGTVVFLQSEQTLVFKVDVGWRYIMAGGLV
EKDSDRGRFNY
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgatggttcgaaaaaaaaatctggaaagaattgttcaaggaattcttcttctttcagtt
ttcaacttctcctcgcataaagagttggatttgctgcaggcgatctcagttccttttgat
gatccgaagcatgtttattttgcggagggtcttcatggtctccatgcatttggcctaaga
gcaggatctgatctgagaactccacactctcttattttccctccagtcatgtttgaaaat
tttgcaatcctggcaactatccgacctgctgattctcagggtggattcttgttctctgtt
gtatctccgtttgattatattgttagcctaggtctgagtataactgcatcatctagttta
ggcaaacagactgcttctctttacctctctaatgttggtaaaatgaaatctaaaccatta
gctgagttctctatcccctcgctccccctctcctggactgcagttgctctcaaggttcag
gccagcatggtcacactcttcattaactgccaagaggttcaaaccatagctgttgctaga
cctcagactgttaaattcgatcctgcttcttctctattcattggtcagggtggtggaaga
catatgaccccctgggaaggagtaatccaggagctgagggttagtcctaaccctgataat
gctgaagattattgcctggagagcacagaggttattatgatcgacggagagaagaaatct
ggtcctccactctcagtacatcatgtaggacagggtgtacagggacctaaaggagataga
ggacctatgggaccaaggggtcccccgggacaaagtgttcgaggagctccgggtttacct
ggacctccagggattccaggagtacctggagcaactggacctcttcgagaacatcaagag
tttgttgttggagagtgtggttgcaatgagagtataattgaacgaagtattgttagatta
accgatgttcttcctaaaggagataaaggagattctgggaaagagggtcaacctggttta
tctggactccagggaccaccaggcccagagggagcccaggggtccaggggaataaaagga
gatagaggatccaggggtgaaccaggacttaccggagctcaaggggttcccggagataaa
ggagaatcaggacaggacggagaacctggacggaacggagaagtaggacctcctggacct
cctggtccacctggattcatcaacggatatgatcccgcctggtctccgaggagcaggatg
atgcaagactccgtccttgtcggaaggcagggtacatcagagaacataaaacagtctggt
tcccctggatctaaaggggagaagggggatacagggaagagcggagagcatggaaggaag
ggttcaacaggacagaagggggagaagggatacgaagggaagaaaggggaacgaggaagc
cagggagagctgggggctacaggaccccctggtaacaagggagatgtaggaccaggaggt
acacctggagtacctggacctacaggagcacctggagtttcagggagtaaaggagacaca
ggagaaccaggtcctcctgggagtattcttcatcttaacacaacaatcctctccggtctt
aaacttaaacctggagagaagggggagagagggctgccaggattaaggggtagaaaggga
gacaatggtatccctggtatgcctggattgaaaggagaacctggtcccctacctgtccta
aacatgacggccctgaagggaccccgaggagaacgagggaggagagggaagcgaggtcga
cctggtcctcctggaactccaggtcctccagctcctccaactataccagactactttgat
gcttttgatatcccctctaaccctgagctaagacctgaaattcctcttcaagtagttcaa
ggacttctccatgaagactccttcagtgtacccatttccggatctcacgggaaacgagaa
tctgagaagagtccggatatctctcactgctcctcaccgctcagtgtcgctactgttgat
aaattatcgcggcatttctcgatttgtccgcctggtacagtcgtcttccttcagtcggag
caaactctggtatttaaagtggacgtaggttggagatacataatggctggaggactggtg
gaaaaggattcagaccggggaaggttcaactattga
DBGET
integrated database retrieval system
