Eurytemora affinis: 111698978
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Entry
111698978 CDS
T07296
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
eaf
Eurytemora affinis
Pathway
eaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111698978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111698978
03041 Spliceosome [BR:
eaf03041
]
111698978
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111698978
Spliceosome [BR:
eaf03041
]
Complex B
Other components
Prp19-related factors
111698978
Complex C
111698978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
TPR_8
TPR_2
Mad3_BUB1_I
NRDE-2
ARM_TT21
PPR
DALR_1
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
111698978
NCBI-ProteinID:
XP_023325255
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MIESAGVGGQGSGKEAHHLVLNEEDLAYEEEILRNPNMIKPWIRYIEHKADSPRNILNLV
FERALKELPGSYKLWYNYLKVRRKQIKGRCITDPGYDEVNNCFERSLVFMHKMPRVWVDY
CKFLTKQQKITRTRRVFDRALRALPPTQHDRIWPLYIKFVRAYPIPETAIRVFRRYLQMF
PENSEDYILYLIDIDRLDEASQVLARCVNNDDFVSKKGKSNHQLWNELCDMISKNPTKIQ
SLNVDAIIRSGLRRYTDQVGHLWNSLADYYIRSGLFERARDVYEESIQTVTTVRDFTQVF
DAYAQFEELALSKKMEEIAESESPGDEDEVEVELRMARFEDLMDRRPLLLNSVLLRQNPH
NVVEWQKRVTLLEGKPREIVNTYTEAVQTVDPKQAVGKLFTLWVNFAKFYETNKQINDSR
IIFEKATHVAYLKVDELGSVWCEWVEMELRHNHHEEALKLLQRATAPPPRRVSYHDDAET
VQMRLHKSLKIWSLYADLEESFGTFKSAKAVYDRILDLKIATPQIIINYGLFLKENNYFE
EAFKAYEKGISLFKWPNVYDIWNTYLSEFLARYGGTKLERIRDLFEQCLDGCPEKYAKNI
YLLYAKLEEEHGMARHSMAVYDRAVAAVEKKETFEVFNIYLRKVAEIYGVTRTRQIYEKA
IEVLGETESREMCVRFAEMETKLGEIDRARAIYGHCSQMCDPRVAPEFWQTWKDFEVKHG
NEDTLREMLRIKRSVQATFNTQVNMMASAMMQSSGTGTVSDLAPGLTLGLKDDMWRLEAK
GMESDIKAGEGAAAAKPNIMFVRGETQSKAVEETQAAANPDEIDIDSEEEEEEEEEEGEG
EKEKVERPVGGVEKMDVPDKVFGGLKKND
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatcggctggagtgggcggccaggggtccgggaaggaggctcaccatctcgtc
ttgaacgaggaggatctcgcctacgaggaggagatactcaggaacccgaacatgattaag
ccctggatccggtatatcgaacacaaggcggattctccgagaaatatcttaaacctggtg
tttgagagagcactcaaggaactcccagggagttataaactatggtataattatctaaag
gtgcgcaggaagcagatcaaggggcggtgcatcacagatccaggatacgacgaggtcaac
aactgcttcgagagaagcctcgtctttatgcacaagatgccgagggtgtgggtggactac
tgtaagtttctcaccaagcagcagaagataacgcggacaagacgagtatttgacagagca
ctaagagctctccctccaacccaacatgacaggatttggcctctgtacataaagtttgtc
cgagcgtatccgatcccggaaactgcaatcagagtattcagaagatatctccagatgttc
ccggagaacagcgaggactacatcctctacctcatcgacatcgaccgcttggacgaggcc
agtcaggtcctggcacgctgcgttaataatgacgatttcgtgtcgaagaaaggcaagtct
aatcatcaactgtggaatgagctgtgcgacatgatttctaagaacccgaccaagattcag
agtttaaacgttgacgccattattagaagcggactcagacgatacacggaccaggttggg
catctgtggaattctcttgctgattactatattagaagtggattatttgagagagccaga
gatgtttatgaagagagtattcaaactgtaaccacggtcagagattttactcaggtgttt
gatgcgtatgcacagtttgaggagctggctctgtctaagaagatggaggagattgctgag
agtgagagtcctggtgacgaggatgaggtggaggtagaactcaggatggcaaggtttgaa
gatttgatggaccgaagacctctcctcctgaactccgtcctgctccgccagaacccgcac
aacgtggtagagtggcagaagcgtgtgaccctactggaggggaaacccagggagatcgtc
aacacctacaccgaggcggtgcagactgttgaccccaagcaggccgtaggcaagctcttc
accctttgggtcaactttgctaagttctacgagacgaacaagcagatcaatgattcccgg
attatatttgagaaagctacgcatgttgcgtacttgaaggttgatgagctgggcagcgtc
tggtgtgaatgggttgagatggagctgcgtcataatcatcatgaagaagctttgaagctg
ctacagcgggcaactgctccgcccccccggcgtgtttcctatcacgacgatgctgagact
gttcagatgcgtctccataaatccctcaagatctggtctctatacgcagatctagaagag
agctttggcaccttcaagtccgccaaggcagtctacgatcgtatcttggatctcaagatc
gccaccccgcagatcatcatcaactacggtctgttcctcaaggagaacaactatttcgag
gaggccttcaaggcttacgagaaaggaatctctctgtttaaatggccgaatgtttatgat
atttggaacacgtatctctccgagttcttggcgcgctacggcggtactaaactggaacgt
attagggatctgtttgagcagtgcctggacggatgcccggagaagtacgcgaagaacata
tacctactgtacgccaagctggaagaggagcacggaatggccagacactccatggccgtc
tacgacagggccgttgccgccgtcgagaagaaagaaacgtttgaagttttcaatatttat
cttcgtaaagttgcagaaatctacggagtcaccagaacccggcaaatctacgaaaaagcg
attgaggttcttggagagacagagtctagggaaatgtgtgttcggtttgcggagatggaa
accaaacttggagagatcgatcgagctcgcgcgatttacggacattgcagccagatgtgc
gatcctcgcgtcgcgcctgaattctggcaaacctggaaggactttgaggtaaagcacggt
aatgaggacacgttgagagaaatgttgagaatcaagagaagcgtccaggcgaccttcaac
actcaggttaacatgatggctagcgctatgatgcagagcagtggaacgggaacagtatca
gaccttgctccgggtctaacactaggactgaaggatgatatgtggagattggaagctaag
ggtatggagagtgatatcaaggctggagagggagcagccgcggccaagcccaacattatg
ttcgtccgcggagaaactcagagcaaggccgttgaggaaacccaagcggcggccaatccg
gacgaaattgacatcgacagcgaggaggaggaagaagaggaagaggaggaaggggaggga
gagaaggagaaggttgagagacctgttggaggagttgaaaagatggatgttcccgacaaa
gtatttgggggattgaaaaagaacgattaa
DBGET
integrated database retrieval system
