Eurytemora affinis: 111699718
Help
Entry
111699718 CDS
T07296
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
eaf
Eurytemora affinis
Pathway
eaf03013
Nucleocytoplasmic transport
eaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111699718
09122 Translation
03013 Nucleocytoplasmic transport
111699718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111699718
03041 Spliceosome [BR:
eaf03041
]
111699718
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111699718
Spliceosome [BR:
eaf03041
]
Complex C
Other components
EJC/TREX
111699718
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111699718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
DUF2026
Bacteriocin_IIc
ComC
Motif
Other DBs
NCBI-GeneID:
111699718
NCBI-ProteinID:
XP_023326213
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MGVLSEEAWTDWEKTGKQEFLKEVKECTIGNKGLLGTADSTLDRLIYDLIWQGIRGQMRR
DLVVSCVGELVSNNTQMANVIVDVIALADVETQVEDGKKDDRKRLADIVKEVTRFLSDSL
VKERLEFDLLGDSGIVKNPKKFFNTVIKLKTKLFYKQQKFNLFREESEGYAKLITELNQD
LSSVSKDSMLEIIKSLIGYFNLDPNRVLDIILESFECQPNEFQFFVGLLREFLPDRETLK
ELLHFKFSAFKENNEDENTPESLYLVTALLIQHEILTLQDVYPWLGPSDDEMMTRAGKEM
AVAKEYLRKMNIVSTKGNDEDNKDGSKDKDINANNQKIGLLAALYKVGGLNYAEEILKNL
PESYCISQPKVALALCELIHKTIDPVYHKYNDLCPRIRARHHEILPGSRFPPQAHTLEDL
SKDAVPMLQTLGADAHRDPTLIYKLIRILKTGLGIKRTVNYEVETKSQDLSGNQFYSLAL
TLANEVFLPSLSLLQSNCCIAEEIWSLIRHFPYAHRYRLYDSWKGETMLKHPVLIRAKAK
TFESIKRIMKMMSKENVKHTGRQLGKLSHSSPALIFSYIIQQIQVADNLIGPVVDSIKYM
SNLSFDVLGFCIIESLNDPDKNRTKTDGTSISMWLTNLAVFCGAVFKKYNIELTGLLQYI
ANQLKAKHSLDLLIVKEVVNKMGGIEAFEEMTKEQLEAVSGGELLRQEAGNFSQVKNTRK
SSGRLKDCLMEMNLAVPLVLLMAQQGSCVVYQETEKDHLKLVGKLFDQCHDTLVQFATFL
ATNLSQDDYSKIMPPLPQLLSEFYVNPDIAFCLARPMFNHLISTKFEELRKADKHWRGKT
SQEKQAKHAEAARMIMEPLTAAITPVYPTKIWDDITPQFLATFWSLTMYDLYVPEKMYQK
KIRELKDAPAKLHENKDLNSTRRKKEAERLNTLMEKLQDEEKRHKEHVERVMVRLRLEKD
QWFLSRSAKTAKNETITQLLQFCLFPRSIFTSSDASYAAKFVTIIHMLKTPNFSTLICFD
RTFCDITYTVTACTENEASRYGRFLCAMLETARRWHKDKDVFEAECSGYPGFITKFKAAA
GPEDPKASHTDTVDFENYRHVCHKWHYKIAKALVVCLESKDYVQIRNALIILNEIIDQYP
LITNLASVLEKRIERVCDEEKEKRKDLYIKARSYQGKLSICKSRMVNERDFHQMRKGKAD
AEEEKEVKEKEKEKEKEKKSESRERGSKSRDRESKSRDRESKSKDRESNSRDRESKSRER
GSESKERTEMGPPASRDSRKSADPGDSDRDFKRKRDSNKEKAKSPVLDRLEKKENLRKEK
EKEKLRKEKDEKDSTRKERKRDREGVSEVEVKKRKEDDDATAKQNGEGKRKSRR
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttctgtccgaagaagcgtggacggattgggagaaaacgggaaagcaggaattt
ttgaaagaagtgaaggagtgtacaattggtaataaaggattactgggaactgcggattct
accctggaccgactcatctacgatctaatatggcaggggatcagaggacagatgaggagg
gatctagttgtgtcctgtgttggggaattggtttccaacaatacacaaatggcaaatgtt
attgttgacgtcattgctttggctgatgttgaaacacaggtagaagatgggaagaaagat
gaccggaaaaggttggcagatattgtcaaggaggtcaccaggttcctctccgacagtctt
gtcaaggaacgactagagtttgatctgttgggagactctggtattgtgaagaatccaaag
aagtttttcaatactgttattaaactcaagactaaacttttttacaaacagcagaagttt
aatttgttccgtgaggagagtgaaggatatgctaaacttattactgaactcaaccaggat
ctatcatccgtgagcaaagatagtatgcttgagattattaaatctttgattggatacttt
aacctggatcccaacagagttctggatataatactagaatcattcgagtgccagcctaac
gagttccaattttttgttggattgctacgcgagtttctacctgatcgagagaccttgaag
gaacttctccacttcaagttttccgccttcaaggagaacaacgaggacgagaacacacca
gagtccttgtatctcgtgacagctcttctcattcagcacgagatactcaccttacaggat
gtctatccttggctgggaccgagtgatgatgagatgatgacaagagctggaaaagagatg
gctgttgctaaggaatatctacggaagatgaatattgtgtcgactaagggaaatgacgag
gataataaggacggtagtaaagacaaggatattaatgcaaacaatcagaagatagggcta
ttggcggcattgtataaggttggtggtttgaattatgcagaagagatcttgaagaatcta
ccagaatcctactgtatatcacagcctaaagtggcattggctctttgtgaactgatccat
aaaactattgaccctgtttatcacaagtacaacgatctctgccccagaattagagccagg
catcacgagattcttcctgggtccaggttcccacctcaagcacacactctagaggacctc
agtaaggatgcggtccctatgctacaaactctaggggcagatgctcacagagaccctaca
cttatttataaactaatcagaatcttaaaaactggtttgggtatcaagagaactgtaaac
tacgaagtggaaactaaatctcaagatctgtctggaaaccagttctactccctagcccta
accctggcaaacgaggtgtttctgccgagcttatccctgctgcaatccaactgttgtatt
gcggaggagatctggtctcttatcaggcacttcccgtatgcacacagatacaggctttat
gacagctggaagggtgagacaatgcttaagcaccctgttctcatccgagctaaggcgaag
acgtttgagtcgatcaagcggatcatgaagatgatgtccaaggagaacgtgaagcacact
ggcaggcagctgggtaaactcagtcatagttcaccagcccttatattctcgtatataatt
caacagattcaggtcgccgacaatctgataggtccggtcgtagactccattaaatacatg
agcaatctttcattcgacgtccttgggttctgcatcatcgagagcctcaacgacccggac
aagaacaggacaaagacggacggaacctcgatctcgatgtggttgacgaatctagctgtg
ttctgcggcgctgtgtttaagaagtacaatattgagttgaccggcctactgcagtacatt
gcaaaccagctgaaggctaaacacagtctagatcttcttattgtgaaggaggttgttaac
aagatgggaggaatagaagcttttgaggagatgaccaaagagcagctagaagcagtttca
gggggtgaactccttagacaggaggcaggcaactttagccaggttaagaatacccgtaaa
tctagtggtagactgaaggactgtttgatggagatgaatctagctgttcctctcgtctta
cttatggcacagcagggtagctgtgttgtctatcaggaaacagagaaggatcatctgaag
ctggttgggaagctgtttgatcaatgtcatgatacattagttcagtttgcaacatttcta
gcaacaaacctctcacaggacgattactccaagataatgcccccactgcctcagctttta
tctgagttctacgtaaaccctgatattgcgttctgtcttgcaaggccgatgtttaatcat
ctgattagcacaaagtttgaagaattaaggaaagctgacaaacactggagaggaaaaact
tcccaggagaaacaggctaagcatgctgaagcagcaaggatgataatggaaccattgacc
gctgctatcactcctgtttatcccaccaagatttgggatgatatcacccctcagtttctg
gcaaccttctggtctctaaccatgtatgatctgtatgtaccagagaagatgtatcagaag
aaaatcagagaactcaaggatgcccctgctaaactccacgagaacaaggatctcaattct
accaggaggaagaaagaagctgaacggttaaacactctcatggagaagttgcaggacgaa
gagaagagacataaggagcacgtggagagggtgatggttaggttaaggctggagaaggat
caatggttcctcagcagatcagctaaaactgctaagaatgagacgataacacaacttctt
cagttctgtctctttcccagatcaatattcacctccagtgatgcgagctatgctgcaaag
tttgtgacgatcatccatatgttgaaaactccaaatttctcaactctaatctgctttgat
cgaaccttttgtgacattacgtacacagttacagcttgtacagagaacgaggctagtagg
tatggcaggttcctgtgtgctatgcttgagactgcaagaagatggcacaaggacaaggat
gtttttgaagcagagtgttcaggttaccctgggtttatcaccaagttcaaagctgctgct
ggacccgaggatcctaaagcatctcacacagacactgtagacttcgagaactacagacac
gtctgccacaagtggcactacaagattgctaaagcgttagttgtctgtttggagagtaaa
gactatgtacagatcaggaatgcactaatcatcttaaacgagataatcgaccagtatccg
cttattacgaacctagcgtctgttcttgagaagaggattgagagggtttgtgatgaggag
aaagaaaagaggaaggatctctatatcaaggctcgaagctaccagggtaaactgtcgatt
tgtaagagccggatggtgaacgaacgggacttccaccagatgaggaagggaaaggctgat
gcagaagaagaaaaggaagtgaaagagaaggagaaggaaaaagaaaaggagaagaagtcg
gaaagccgggagcggggaagcaagagcagagatcgcgagagcaagagcagggatcgtgag
agcaagagcaaggatcgtgagagcaatagcagggatcgtgagagcaagagtagggagaga
ggaagcgagagcaaagagagaaccgaaatgggtcctcctgcttctagagattcaaggaaa
tctgcggatcccggggattcagacagggatttcaaacggaaacgtgactctaacaaggag
aaagctaaaagtccagttctagacaggttagagaagaaggaaaatttgaggaaggagaaa
gagaaagagaaactgaggaaggagaaagatgaaaaggattccacgaggaaggagaggaag
cgggatcgcgagggcgtttctgaggttgaagttaagaaaaggaaagaggatgatgatgcg
accgcgaaacagaacggagaagggaaaagaaaatcaagaagatag
DBGET
integrated database retrieval system
