Eurytemora carolleeae: 111700429
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Entry
111700429 CDS
T07296
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
eaf
Eurytemora carolleeae
Pathway
eaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111700429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111700429
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111700429
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111700429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
LSDAT_prok
ADIP
COG3_N
Motif
Other DBs
NCBI-GeneID:
111700429
NCBI-ProteinID:
XP_023327095
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MAGARKLQAEIDRCLKKVTEGVEKFEETWTKVHNASNQNQKLQEKYEEDLKKEIKKLQRL
RDQIKSWLTSGEIKDKTILLENRKLIETQMERFKVVERETKTKAYSKEGLTASMRLDPAE
RERAEVIQWLNSCIETLNIQVDQFEAEIESLNCGGKRKKGRNEDNARLEECQMWVEKHRD
HIQKLETLLRMLDNTQVESGVIRDIKEDINDYIENSQEPDFVENEYIYDDIEGLEEMLLD
VSNLDIGAPEHTSVDASETASSTNSVSGNSPILGQPVYSNHNHSSDTVSGLGMAPEELKR
RHRSSQSDDSKSSKKGGSTVLPPSSPLPTQGNKVSSTPIKSSSQNMFSLSQSPNNTSPSS
GLQGVTQSHALNPSLASYPNYLRRSQPNLTNPSGQIIPNFAAVTAQHNGHPACSAPLDTQ
EAEISTPPPDRPAPHSPTGSGRSVELGGAPGLPAPGSYPHPSQGVRDVPSSQFNGGTLHN
LQTSKELPESLSSLKSLAQQALSSGSLIADSNSSQSGHLGLIGGFGVLDEIGRSGLKTEA
HIPPLLGVAPLGPVPLNKDHQFQYNMLEAACHHLPHPSDSERLRPYLPRTPVNTPSHYPQ
APPPGIDTIDFFTRLSTETLFFIFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEE
PKIINDEYEQGTYIYFDYEKWGQRKKEGFTFEYRFLEDRDLN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgctcgaaagttgcaagccgaaatcgacagatgcctgaaaaaggtgacggaa
ggtgttgaaaaatttgaggaaacctggacaaaagtccacaacgcgtcaaatcagaatcag
aagttacaggaaaagtacgaggaggatctcaagaaggagattaagaagcttcagagatta
cgagatcagataaaatcatggctaacctcaggagaaatcaaggacaagacgattctcttg
gagaacaggaaactaatagaaacgcaaatggagaggttcaaagtagtggagcgcgagacg
aaaacgaaagcgtacagcaaagaaggattaacggcgtcaatgcgtctggatcctgcagaa
cgagaacgagctgaagtaattcagtggctcaactcctgtatagaaaccctaaacatccag
gttgatcaatttgaagctgagatagaatccttgaattgtggaggaaagaggaaaaaagga
agaaatgaggataatgcaagactggaagaatgtcagatgtgggttgagaaacatcgagac
catattcagaagctggaaaccctgctcaggatgctggataatacccaggttgaatctggt
gtgatacgggatattaaggaggacatcaacgactatatagagaacagtcaggagccagat
ttcgtggagaacgagtatatttacgacgatatcgagggactagaggaaatgctgttagac
gtaagtaatcttgatattggtgcccctgagcatacctctgttgatgctagtgagacagct
agctctacaaactcagtgtcagggaactcacctattctaggacagccagtttactccaac
cataatcattccagtgatacagtgtctgggctgggtatggccccggaggagttaaaacga
agacatcgaagctcgcagagtgatgacagcaaatctagtaagaagggaggatctacagtt
cttcctccttcctcaccccttcctacgcagggcaataaggtgtctagtacgccgattaag
tcatcatctcagaacatgttttctctcagtcaatctccgaacaacacgagtccgagctca
ggattgcaaggtgtaacacagtctcatgccctcaacccatccttagcctcgtatccaaac
tatctacgacgtagccaacccaacctaaccaaccctagtgggcagataatacccaacttt
gctgctgttaccgctcaacacaatggtcatcctgcatgctccgcccccctagacacccag
gaggcagaaatatctactccgcccccagaccggcctgcaccacatagtcctacggggagt
gggcggagcgtggaattgggcggagctcccgggctaccagcacctggctcctatcctcac
ccgtcgcaaggtgtacgggatgtacctagttctcagttcaatggcggaacattacacaat
ttacaaacttccaaagaattgccagaatccttatcctcccttaaatctcttgcgcagcaa
gctctctcaagtggaagtttaattgctgacagcaatagcagtcaatcaggtcatcttgga
ttgattggtgggtttggtgtgctagatgagattggcagatctggattaaaaactgaggct
catataccgcctctactgggggtagcgccacttggtccagttcctcttaacaaggatcat
caatttcagtacaatatgctagaggcagcttgtcaccatctcccacatccttcggacagt
gagagattaagaccttatctacccaggacacctgttaatacaccttcacattatccacag
gccccgccccccggcattgatacgatagactttttcacgagattgtctacggaaaccttg
ttctttatcttctactatatggaggggacgaaagcgcagtatctggcagcaaaggcctta
aaaaagcaatcttggaggttccacacgaagtacatgatgtggtttcagagacatgaggag
cccaagatcattaacgatgaatatgagcagggaacctatatctactttgattacgagaag
tggggacagcggaaaaaggaggggttcactttcgagtacaggtttctagaggaccgggat
ctcaactga
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