KEGG   Eurytemora carolleeae: 111700597
Entry
111700597         CDS       T07296                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
eaf  Eurytemora carolleeae
Pathway
eaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111700597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eaf03041]
    111700597
Spliceosome [BR:eaf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    111700597
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_Gbeta WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 DSE1_N WD40_MABP1-WDR62_1st PRP4 NBCH_WD40 ANAPC4_WD40 Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_EML ASA1 Beta-prop_DCAF4 Beta-prop_RIG_2nd CFAP251_N eIF2A Beta-prop_NOL10_N PAC11 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_SCAP WD_LRWD1 GtfB_M
Other DBs
NCBI-GeneID: 111700597
NCBI-ProteinID: XP_023327336
LinkDB
Position
Unknown
AA seq 497 aa
MQNFRPKMSDDEDIQYIKRKKVVHFGTLSENRGESSVENIQISSEYIEMDKDVLSSDKQE
MLEEFERRRRVRAITVSTNDSEVKSELRLLGEPICLFGEGPADRRNRLRELIGKIGADVL
QKKKMQSEVVEEKKDDESTWYHEGPESLKIAREWLASYSIPRAVARLSRLREESDLPEKT
KMAKKQEIQKKMKSLDVEASQIVDTRPVSWCQFSPDSKMLVTGSWSGVCKLWSVPDCKEI
RPLRGHTTHVGSVVFNPKSTLGLDPAEPNLASCAADGSVKLWSLDSEEPVADIEGHDARV
SRCAYHPSGRFLGTAVWDNSWRLWDLEQLTEVQHQEGHSKEVYCLAFQQDGSLCCSGGLD
SFGRVWDLRTGQCIMFLEGHLKGITGVDWSPNGYNIVTCSQDNSCKIWDLRKRNIEYTIP
AHTKLVSNVRFEKNTGEYLVSSSYDGTAKVWASKTWLPLATLRGHDNKLSGCDVSPDGSM
IATCSFDRTFKLWNFQH
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgcaaaatttcagaccgaaaatgtctgacgatgaggatattcagtacatcaagcggaag
aaagtggttcatttcggaaccctcagcgagaacagaggagagtcgtcagttgaaaatata
cagatatcttccgagtatattgagatggacaaggacgtgttgtccagcgacaagcaggag
atgctggaggagtttgagcgcaggcgccgcgtccgcgccataacggtgtccactaacgac
tccgaggtgaagtccgagctgcggctactgggggaacctatctgcttgttcggggagggt
ccagctgacaggagaaacagattgcgtgaattgatagggaagattggtgctgatgttctt
caaaagaagaaaatgcagtctgaagtagtagaagaaaagaaagatgatgaatctacttgg
tatcacgaagggcccgaatctctcaaaatagcacgtgaatggttggcaagctacagtata
ccacgagctgttgcgcgcttaagtcgtcttcgcgaagaatccgatttgccagagaaaaca
aagatggcgaagaagcaagaaattcagaagaaaatgaaaagtttagacgtcgaggccagc
cagatagtggatacccgtcctgtatcctggtgtcagtttagtcctgactccaaaatgctg
gtgactggtagctggtctggggtctgtaaactctggagtgtacctgactgcaaggagatc
cgaccactacgtggacatacaacccacgtgggatctgtcgtcttcaatcctaaatctact
ctcggtctggatcctgcagaacccaacctggcatcctgcgcagctgatggttccgtcaaa
ctctggagtttagactcagaggaaccggtagcagacattgaaggtcatgatgcgcgagta
tctagatgtgcatatcatcctagcggtcggtttcttggaacagcagtctgggacaactca
tggagactttgggacttagaacagcttacagaagttcaacatcaggaggggcatagtaaa
gaggtttactgccttgcttttcaacaggatggatctctgtgctgtagtggaggtctggat
agttttggtagagtttgggatctacggacaggacaatgtatcatgttcttggagggacat
ctcaagggtataacaggggttgactggtctcctaacggatataatattgtgacctgtagt
caggataattcatgtaaaatctgggatttaagaaagagaaatattgagtacactatccca
gcacacactaaactggtgtctaatgtgaggtttgagaagaatactggggaatatctagtc
tctagtagttatgatggaactgccaaggtttgggccagtaagacctggttacccctggct
accttgagggggcatgataacaaattgtctggctgtgatgtatctcctgatggttccatg
atcgctacctgctcatttgacagaacatttaaactgtggaacttccagcattga

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