Eurytemora affinis: 111700919
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Entry
111700919 CDS
T07296
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
eaf
Eurytemora affinis
Pathway
eaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111700919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111700919
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
111700919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
111700919
NCBI-ProteinID:
XP_023327767
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MSMPVDEFLPGFGSVDEFTQANLKKILHATKLSNDLPGEKREDFDYYSTFPEFRKVLSVQ
GRKLRDMLKMQLNFQGINSGVGSSQVEDLVDLLTDTNDTILERINMNLDEAAGLKREVNP
LLLEVSQSNVNRVSGSWNNFNRNQKKSENKKDNDVKLLTARNVMRPQVKFKSFIDNTEKP
FTPRLKEKPHSKKPLSILIEYDEVGGEFFSHPYLFEIERFSPSHDQLKPRPIPIPLGVER
VDMDFIETKEQLEECIKELSKHSIIAIDLEAHSYRSYLGFTCLIQISTEHKDYLIDPFNI
WGEMNLLNEITTNPSIVKVFHGCDSDVVWLQRDFSVYLVNVFDTHQAGKLLGLPRLSLAW
LLEHYCKVYADKQYQLADWRIRPLPEAMVYYARQDTRYLIFLYEKLKIELLEKGNEQQNL
LRAALQQSNILCSTRYYKPIRTSASHLDLLKKSKSVLNNKQLFALQELYSWRDGVARIED
ESTQYILPNHMLLKICTELPREMQGILACCNPVPPLVKQHLQSLHMVILKARNKTLQTVD
SDIHGSFNNTENEVAGNENEYNENPLKCPLELSNLSELGTGLKTLVSKQGEIMEFSPKMN
NNLIKKKSSLGVFDVKDEEKKKKKKKEKKKKNEIEKFISPFQRYQMLRPYLESLKKSDEP
DSANQQVKSADVRLESIKLHFQKLTDMTPKPKKVEIEEEEEEEEEVQNLESDEEVLPYRK
SNGPLPKKMRFVDKKSVPDSAEKARLLEQVEKEAEKRKLEIENKLVQEEIMEKKKKKKRK
SDEEVPFESKIPKTGAGFDYTNVDYDKMFEKSRQDRSDFNPVRHDKKNNRMDKTKQKTKN
NGKSFTFKK
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgccggtcgacgagttcctgcctgggttcggcagcgtggacgagtttacccag
gccaacttaaagaagatcctccacgctactaaactatcaaatgatcttccaggagagaag
cgtgaagattttgattactattcaacattcccagagttcagaaaggttttatcagttcag
ggacggaagttgcgcgacatgttgaaaatgcagttaaactttcaggggataaactcagga
gttggttcttcacaggttgaggatttggttgatctgctcacagacaccaacgatactatt
cttgagagaataaacatgaacttagatgaagctgctggactaaagcgggaagtgaatcct
cttttgcttgaagtcagtcaatccaatgttaatcgagtatcagggtcctggaacaacttt
aacagaaatcagaagaaatctgaaaataagaaggataatgatgtaaaacttctcaccgca
aggaatgtaatgagacctcaggttaaattcaaatctttcatcgataacacagagaagccc
ttcactcctaggcttaaagaaaagccgcacagtaagaagcctctgtctatattgattgag
tatgacgaggtggggggagagttcttcagtcatccctaccttttcgagatagagaggttc
agtccatcccatgaccagctcaaacccagacctataccgatccctctgggggtagagcgg
gtagacatggactttatcgagaccaaggagcagctggaggagtgcatcaaggaactatcc
aaacatagcattattgccattgacttagaagctcattcctacagatcgtacctagggttt
acttgtcttattcagatttctacagaacacaaggattatctgatcgatccttttaatatt
tggggggagatgaacttactcaacgagattactaccaaccccagcatagtcaaggtattc
catggatgtgatagcgatgttgtctggttacagcgagatttctccgtttatcttgttaat
gttttcgatactcatcaagcagggaaacttctaggactaccaagattaagtttggcgtgg
ttactagaacactactgtaaagtgtacgctgataaacaatatcagcttgcagattggaga
ataaggcctctgcctgaggcgatggtttactatgctagacaggatacaagatatcttatc
ttcttatatgagaaactaaagattgagctgcttgagaagggaaatgagcaacaaaattta
cttcgtgcagctctgcagcagagtaatattttgtgttctaccagatactataaacctatc
agaacctcagcaagtcatcttgatcttctgaagaaatctaaatctgttctgaacaacaag
caactctttgctttacaggaactgtacagctggagggatggtgtagctaggattgaggat
gagagtacccaatatattctaccaaaccatatgcttctcaagatatgtaccgaactaccg
agggagatgcagggtatcctagcgtgctgtaaccctgtacctcctctagtcaaacaacat
cttcagtctttacacatggttatactcaaggctagaaataagacgctgcagaccgtggac
tctgacatccacggttccttcaataacacggagaacgaggtggcgggaaacgagaacgag
tacaatgaaaatccgctaaaatgtccgctagagctgtccaacctatcggaactcggaaca
ggattaaaaacgcttgtctccaagcagggagagataatggagttttctccgaagatgaat
aataatttaatcaagaagaaatcttcactcggggtctttgatgtcaaggacgaagagaag
aagaaaaagaagaagaaggagaaaaagaagaagaatgagattgagaagtttatcagtcct
ttccagagataccaaatgctgcgaccctatctagagagtttgaagaaatcagatgaacca
gactcagccaaccaacaggttaaatctgccgatgtacgactggaaagtataaaactgcac
ttccaaaagttgacggatatgacaccgaaacctaagaaagtagagattgaagaagaagaa
gaggaagaggaagaagttcaaaatcttgaatctgatgaagaggttttaccctaccggaag
tccaatggtccacttcctaaaaaaatgcgtttcgtggataaaaaaagtgtgcctgattct
gctgagaaggcgagattgcttgaacaggttgagaaggaagcagagaaaaggaaactagag
atagaaaataaacttgtccaggaagaaataatggagaagaagaagaaaaagaaaaggaaa
agtgacgaagaagttcctttcgagtcgaaaatccctaagaccggtgctgggttcgactac
actaatgtcgactacgacaagatgtttgagaaaagtcgacaggatcgatctgatttcaat
ccagtgcgacatgataagaagaacaatcgaatggacaagacaaaacagaaaactaagaac
aacgggaaaagttttacgtttaaaaaatag
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