Eurytemora affinis: 111701259
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Entry
111701259 CDS
T07296
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
eaf
Eurytemora affinis
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eaf03009
]
111701259
Enzymes [BR:
eaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111701259
Ribosome biogenesis [BR:
eaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
111701259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Col_cuticle_N
Motif
Other DBs
NCBI-GeneID:
111701259
NCBI-ProteinID:
XP_023328223
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MSDTEDEKKKLPFHEMELDERILKAIAKLGWIDPTLIQERGIPLLLEGRDLLARGRTGSG
KTGAFSIPLIQRILRIKGRQDITVNQAVRGVVLCPSRELSRQTTQVLTDLANSCVGVIRI
LDIGSKEVSAVKPLLRDLPDILVGTPGRLAQHLSCTTSQVDIVLLVDLHNISGRFVLLVD
LHNISGRYCTPGRLAQHLREKNVDLSSSLEIMVIDEADLIFSFGFEADIRFILEQVPPIY
QAVLTSATLSEDVEKLKKLVLNNPVILKLSEPDLPDSSQLTQYVFKLEEEEKYVLIYALF
KLELIRGKTIIFVSTVDRCYKMKLYLEQFNIPCCVLNSELPAASRYIDDGENGVGKSKKK
EKKVDKDKEASKRVKDKESGVARGIDFQFVSNVVNFDFPKNSDSYVHRVGRTARAGQIGT
ALSLVAAKEMDQLKEVEDRLQQVAGGEALRPYQFKMEELDGFKYRARDAWRAVTKVAVRE
ARLKEINYVQVAVREARLKEIKQELLNSNKLISYFEDNPRDRQILRHDKNLHIVKQQEHL
RNVPEYIIPETLRSMTGGGGRKKKKNHPQISDVQKKFNKRKADPLDFGVKRKK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacagaagatgaaaaaaagaaattacctttccatgagatggagttggatgaa
aggattctgaaagctatcgctaaacttggttggattgatcccactcttattcaggagcgt
ggtattccgttgcttcttgaaggaagggatctgctggcaagaggtagaactggatctggc
aaaaccggagccttttccattcctcttattcagagaatactaaggataaagggtcggcag
gatattactgtaaatcaagctgtgcgtggtgtagtactttgccctagtagagaattatca
aggcaaaccactcaagttttgacagaccttgcaaattcttgtgtaggagttatcagaatt
cttgatattggatcaaaagaggtttctgctgtcaaaccactgcttagagatctaccagat
atattggttggtactcctggtagacttgcacaacatctcagttgcacaacatctcaggta
gatattgtactcctggtagacttgcacaacatctcaggtagatttgtactcctggtagac
ttgcacaacatctcaggtagatattgtactcctggtagacttgcacagcatctcagggag
aagaatgttgacctctctagttccctcgagatcatggtgattgatgaggccgacctcata
ttttcatttgggttcgaggctgatatcaggtttatcctggaacaggttccaccaatctac
caggctgtgttaacgagtgctactctatctgaagatgttgaaaaattgaagaaattggtt
ttaaataatcctgttattttaaaactatctgaaccagatttaccagactctagccagcta
acacagtacgtgttcaagctggaggaggaggagaagtacgtcctaatctacgctctcttt
aagctcgaactcatcaggggaaaaacaatcatttttgtctcaacagtggacaggtgttac
aagatgaagctgtacctggaacagtttaatattccatgctgtgttcttaactccgagctt
ccagcagcctccaggtatatagatgacggtgagaacggtgtagggaagagtaagaagaag
gagaagaaggtggataaagacaaggaagcaagtaaacgagttaaagataaagagagtggt
gtagcacgaggaatagattttcagtttgtgtctaatgttgtcaacttcgattttccaaag
aactctgacagttacgtacaccgtgttggtagaacagcgagggcgggacaaattgggacc
gccctcagtctggtggccgccaaggagatggatcagctgaaagaggtggaggatagactc
cagcaggtcgcaggaggagaagcactccgtccatatcagtttaagatggaggaattggac
gggtttaaatatagagccagagatgcatggagagcggtaactaaggttgcagtacgcgag
gctagattgaaggagataaattatgtacaggttgcagtacgcgaggctagattgaaggag
ataaaacaagaattgttgaattcgaacaaactaatttcatactttgaagataatcccaga
gatcgacagatacttagacacgacaagaatcttcatattgtgaagcagcaagagcatctg
aggaatgttccggagtacatcataccggagaccctccggagtatgacgggaggaggagga
cggaagaagaagaaaaatcatcctcaaatctccgatgttcagaagaaatttaacaagagg
aaagcagatcctctcgactttggggtcaaacgaaaaaagtga
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