Eurytemora affinis: 111701702
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Entry
111701702 CDS
T07296
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1-like
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
eaf
Eurytemora affinis
Pathway
eaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111701702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111701702
Enzymes [BR:
eaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
111701702
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
111701702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
CbiA
AAA_22
AAA_16
MMR_HSR1
nSTAND3
AAA_10
ATP_bind_1
TniB
AAA_29
AAA_18
Motif
Other DBs
NCBI-GeneID:
111701702
NCBI-ProteinID:
XP_023328870
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MKNVYRLEADEELRIEVDCPKTEKISVELMTGVAEIFGTEMVQHTKYYFAAGAKISVFTY
HGCTVEVSGNLEVEPYSSKETPMIIYLNTHAALEQLRLKAEQDTDSTARGPITLLVGPTD
VGKSTVCRILLNYAVRMGRRPIYVDLDVGQGSISVPGSFGALLVERHAGIEEGFSQNSPL
VYHYGHKTPGHNLVLFNQLVSKIADVVRDRLAANKKAQISGVVINTCGWVKGEGYNQIKH
IAQAFEVDVIVVLDQERIYNDLVRDMPKFVKVVWQPKSGGVVSHQRTDL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgtttatagactggaggcagacgaggagctgagaattgaggttgattgtccc
aagacggagaagatcagcgtcgagctgatgaccggtgtggcggagatattcggcaccgag
atggttcaacacactaaatattattttgcagccggagccaaaatatcagtattcacgtac
cacggttgcactgtagaggtatctgggaacctggaggtggaaccctactcctcgaaagag
acgccaatgataatctacctcaacacccacgctgcactcgaacagctcagacttaaggcg
gagcaggatacggacagtactgcacgtggtccgataaccctcctcgtggggccgacagat
gtaggcaaatctacggtttgcagaatccttctcaactacgcggtccggatgggtcggcgt
cctatctatgttgacctagatgtaggtcagggtagtatatctgtgccaggatcatttgga
gccctgttggtggagcggcatgctggtatagaggagggtttcagtcaaaactctcctctt
gtttaccactacggacacaagacacctggacataatcttgttctgtttaaccaactcgtc
tcaaaaatagcggatgtagtgcgagatcggttagcggcaaacaaaaaagcccaaatttca
ggtgtggttataaacacatgcggctgggtgaagggagagggatacaaccaaattaaacac
attgctcaggctttcgaggttgatgttatcgtagtattagatcaggaaagaatatacaac
gatttagtgcgcgatatgcccaagtttgtgaaggtagtctggcaacctaaatctggggga
gtagtcagccaccagagaacagatctttga
DBGET
integrated database retrieval system
