Eurytemora affinis: 111701708
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Entry
111701708 CDS
T07296
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
eaf
Eurytemora affinis
Pathway
eaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111701708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eaf03041
]
111701708
Enzymes [BR:
eaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111701708
Spliceosome [BR:
eaf03041
]
Complex C
Other components
Step II factors
111701708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
GIPC1_GH2
nSTAND3
AAA_30
T2SSE
Flavi_DEAD
PhoH
Transformer
ATPase
Myosin_head
TsaE
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111701708
NCBI-ProteinID:
XP_023328878
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MDELRRLEHLSLVSKVCTELDNHYSMNDKDLAEFIIDLAQKNPNFDGFKKSLLENGAEFA
DSFIENLLRIINHMMPKKGKENESRNGGGNFDYLREQLPFLALPDDAKKPEVVKESRGPD
VDDVMSFLESMAPSKVKENVKERPRRSLTPSRSRSRSDSREKKRKKKKRKKSRSGSRDRY
RNRSRSRERRRSRSRDRKRRRSRSSSRDRKKLEEQRKLLAKKEMAEGPELFRVYTGKVQN
ITNFGCFVALEGFRKKAEGLVHISQLRREGRVKSVEEVVLKGQTVKVKVLSITSGSKISL
SMKDVDQETGEDLNPTGNNRVPGGTREADLNLRNPERPLDFLGENHEAVVLDDDDYRHKK
KVTRISSPERWELQQMMAANVIDKSELPDFDEETGLLHKEDDDEQDLEIELVEDEAPFLK
GQGRMMNNLSPVRIVKNPDGSLAQAAMMQGALAKERREQKMVDRQAADSEAPTGSTKNWN
DPMPHGVTEYQGQNAGQDAKPNPFQDMPEWKKSIIGGSKGSYGKKTSMSILDQRQSLPIY
KLKDELIKAITENQILIVVGETGSGKTTQMTQYIAEAGFTMRGKIGCTQPRRVAAMSVAK
RVAEEFGCRLGQEVGYTIRFEDCTTPETIIKYMTDGMLLREALIDSEMGTYSCIMLDEAH
ERTIHTDVLFGLLKKAVKARPELKLIVTSATLDAVKFSEYFFEAPIFTIPGRTFPVEILY
TREPETDYLDASLITVMQIHLNEPPGDVLLFLTGQEEIDTACEVLFERMKSLGPEVPELI
ILPVYSALPSEMQSRIFDPASPGSRKVVIATNIAETSLTIDGILYVIDPGFVKQKVYNSK
TGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLAST
LLQLKAMGINDLIGFDFMDAPPVEAMIHALELLHTLSALDDEGLLTRLGRRMAEFPLEPN
LAKMLIMAVNIQCSDEILTIVSMLSVQNVFYRPKEKQQIADQKKAKFNQAEGDHITLLAV
YNSWRNNKFSSAWCYENFVQQRTLKRWLIDVRKQLLGIMDRHKLDVVSCGKSTTRVQKAI
CSGFFRNAAKKDPQEGYRTLVDAQMVSIHPSSALFHRQPEWVVFHEVVQTTKEYMREVTT
IDPKWLVEFAPAFFRFSDPTKLSKFKQTQRIEPLHNKYEEPNAWRISRTRKRRN
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactacgacgtttagaacatctatctcttgtctctaaagtatgtacggagttg
gacaatcactactccatgaatgataaggatctagctgagtttatcatagacctggcgcag
aagaatccaaatttcgatgggttcaagaaatcgttattggagaacggcgccgagttcgcg
gattcgttcattgagaatctgctcaggatcatcaatcacatgatgccgaagaaaggaaag
gaaaatgaatctagaaatggcgggggaaattttgactatttgagagaacagttgccgttt
ctggcacttccggacgacgcgaagaaaccggaagtggtgaaagaaagtcggggacctgat
gtcgatgacgtcatgtcctttttggaatctatggctccgtcaaaggtcaaggaaaatgtt
aaagaaagaccgcgaagatcattaactccgtcaagatcgagatcaagatcagattctaga
gaaaagaaacgaaagaagaagaaaagaaagaagagtagaagtggtagcagggacaggtat
aggaacagaagcagaagtagggaaagaaggagaagtcgaagcagagaccggaagcgtcgg
cggagtcgaagctccagcagagaccggaaaaagcttgaggagcagcggaagctgttggca
aagaaggagatggccgaaggaccagaactgttccgagtttataccgggaaggttcagaat
atcactaattttggatgcttcgtggcgctagaaggattcagaaagaaagctgaggggctt
gtacatatttctcagctgagaagagaaggaagagttaaatcagtcgaggaggttgttctg
aagggacaaactgtcaaggtgaaggtgttgagtatcacctcgggtagcaagatctccttg
tccatgaaggatgtagatcaggagactggagaggatctcaaccctacagggaacaacagg
gtcccaggaggaactagggaggctgacctcaaccttaggaaccctgagagacccttggat
ttcctaggagagaatcacgaggctgttgttctcgacgacgatgattacagacataagaag
aaggtgacccgaatctcttcccctgagaggtgggagctccagcagatgatggccgccaat
gttattgataagagtgaactcccggatttcgacgaggaaacaggattactacacaaggaa
gatgatgacgagcaagatctagaaattgaattggttgaagacgaggctccctttctcaag
ggacaaggacggatgatgaataatctatctccagttcgtattgtcaagaatcctgatgga
tctttagcccaggctgccatgatgcagggagctctggctaaggagcgaagggagcagaag
atggttgaccggcaagctgcggacagtgaggctccaacaggctccacaaagaattggaat
gatcccatgccacacggagttactgagtaccagggtcagaacgctggtcaggatgccaaa
cccaaccccttccaggatatgccggagtggaagaaaagtattattggaggatcgaaggga
tcctacgggaagaaaactagtatgtcaatcctggatcagaggcaatcacttcctatatat
aaacttaaggacgagttaatcaaagcgataactgaaaaccagattctgattgttgtcggg
gaaacaggaagtgggaaaactacgcaaatgacgcagtacatcgctgaggcggggttcaca
atgcggggaaagattgggtgtacgcaacccagaagagttgccgcaatgtcagttgctaag
agagtagctgaggagtttggttgcagattgggacaagaggttggatacacgattcgtttt
gaggactgtacaacaccagagactattattaagtacatgacagacggtatgcttctcagg
gaagctcttatagactcagagatgggaacttacagttgtataatgttggacgaggcccac
gaacgtacaatccacacagatgtgctgttcggtctcctcaagaaggctgtgaaggcgaga
ccagaactcaagcttattgtaacctccgctaccctagacgcggtcaaattctcagagtac
ttcttcgaggctccaatctttaccattcctgggagaacatttcctgtagaaatattatac
accagagaaccagagaccgattatttggatgctagtcttattactgttatgcagattcat
ctaaacgaacctccaggggatgtattgttattcttaactggacaggaggagattgataca
gcatgtgaagtactcttcgaaagaatgaaatcgttgggaccagaagttcctgaactaatc
atacttccggtgtacagtgccctgccatcagaaatgcagtcgcgtattttcgacccagca
tctcctggttctaggaaggttgttattgcgactaatatcgccgagactagtttaaccatc
gacggcattctctatgtgatagatcctggctttgtcaaacagaaggtttacaacagtaag
actggaatggactccctggttgtgacccctatatcccaggcagcggccaagcagagggcg
ggtcgtgccggtcgaaccggaccgggcaaaacctatagattgtatacagagcgagcgtac
agagatgagatgttaccaaccccggttcctgagattcagcgaacaaatcttgcttcaact
cttcttcaacttaaggcaatgggaataaatgacttgatagggtttgatttcatggatgca
cctcctgtggaagcaatgattcatgctctagaactacttcatacactctcagctctagat
gatgaaggcctgttgacccggttaggtcgtcgaatggccgaattccccctggagcctaat
ctagcgaagatgttgatcatggccgtgaacattcagtgctccgacgagattctaaccatc
gtgtctatgctctcagttcagaatgtattctatcgacccaaggagaaacagcagatagcg
gatcagaaaaaggctaaatttaatcaagcagagggagatcatattactctactagcagtc
tataattcatggagaaataataaatttagttctgcttggtgttatgaaaactttgttcag
cagagaacactgaagagatggttaatagacgtgagaaaacagttgttgggtattatggac
agacataagcttgatgtggtcagctgtggtaaaagtaccactagagtccagaaagcaatc
tgctccgggttcttcaggaacgcagcgaagaaggatccccaggagggttacagaactttg
gtggacgcacagatggtttctattcatccaagcagtgccctgttccaccgtcaacccgag
tgggtcgtcttccacgaggttgtccagaccaccaaagagtacatgagagaggtcaccacc
atcgaccccaagtggttggtcgagtttgctcccgcatttttccgattctccgatccgacc
aaactctctaaattcaagcagactcagaggattgaacctctgcacaacaagtacgaggaa
cctaacgcctggagaatctcaagaacaagaaaacggcgaaattaa
DBGET
integrated database retrieval system
