Eurytemora affinis: 111701732
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Entry
111701732 CDS
T07296
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
eaf
Eurytemora affinis
Pathway
eaf03022
Basal transcription factors
eaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111701732
09124 Replication and repair
03420 Nucleotide excision repair
111701732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaf03021
]
111701732
03400 DNA repair and recombination proteins [BR:
eaf03400
]
111701732
Transcription machinery [BR:
eaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111701732
DNA repair and recombination proteins [BR:
eaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111701732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
HTH_Tnp_Tc5
MCM4_WHD
Motif
Other DBs
NCBI-GeneID:
111701732
NCBI-ProteinID:
XP_023328908
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
YDYDYDYEGIEAQLADRERVKEKLVELLPKFKRKINKELEEKNKTLSDNPGLLQLYKDLV
ITQIISAEEFWSSHASQYIKQKQGVFQEVGVSGSFLSEIKPQADGANGLRYNLTPDIIES
IFKTYPAVKKKHFENVPSKLSEQEFWTKFFQSHYFHRDRIHAQGTTDIFTECAKEDDKFM
KKQMKKGVDETLADIQGGTSQNIIHQNIIKRFNHHSIMVMEAAENKEAVEEAQPQPPKAS
RKRLNEKTAYEDLDAPQPKKESNLSLSRMERYFTGPTPAASQDYLTQDELKRSRTNLAAE
LETWASFGQRHQSVLTSSNAVHVLGELCPGGSMMTGRTDKLAEQCPVSVQADLRQLYSSL
CELIRHFWSSFPPTTPELQEKAKKMYDTLQKFQSMKVRPFEKEVERRYSAGGGLITQHIN
SMLEAAYRKYTTWYSRKQKS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
tatgattatgattatgattatgaaggaattgaagctcagttagcggacagggagcgtgtg
aaggagaagttagtggaacttttaccaaaatttaaacggaaaataaataaggagttagag
gagaagaataaaacattatcagataaccctggtttactccaattatacaaggatctggta
ataacacaaatcatatcagcagaagagttttggtcgagtcatgcttctcagtatataaag
cagaagcagggagtgtttcaggaggtcggagtatcaggatccttcttatcggagataaaa
cctcaagctgatggagctaatggtctccggtacaatttaaccccagacatcattgaatcc
atcttcaagacctaccccgccgtgaagaagaagcactttgagaatgtgcccagtaaactc
agtgaacaggagttctggactaaattcttccagtctcactacttccatagggacaggata
catgcgcaggggactacagatatatttacagaatgcgccaaggaggatgataagtttatg
aagaagcagatgaagaagggtgtagatgaaaccttggcagatatacagggaggaacaagc
cagaatataattcaccagaatataataaaaagattcaatcatcattcaataatggtaatg
gaggctgcagaaaacaaggaggccgtggaggaggctcaacctcaacctccgaaggcatca
aggaagagattaaacgagaagacagcttatgaggatcttgatgcccctcaacctaagaag
gaatccaaccttagtctcagccgtatggaaagatattttactggccctaccccggcagct
agccaggattatctaactcaggatgagttaaagcgcagtagaacgaacctagcagctgaa
cttgaaacctgggcaagctttggtcaaagacatcagagtgtgttgacgtcctcaaatgct
gttcatgttttaggagaactttgtcctggaggaagtatgatgacgggtaggacagataaa
ctagcagagcagtgtcctgtatctgtacaggcagatctacgacaattgtactcttctctt
tgtgagctaattagacatttttggtcctccttcccacctactactcctgaattacaagag
aaggcaaagaagatgtatgataccctgcagaagtttcagtcaatgaaggttagaccgttt
gagaaggaagtagagagacggtatagtgcggggggaggactaattactcagcatataaac
agtatgctggaagctgcatacaggaagtacacaacgtggtattcacgcaagcaaaaatcc
tag
DBGET
integrated database retrieval system
