Eurytemora carolleeae: 111703682
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Entry
111703682 CDS
T07296
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
eaf
Eurytemora carolleeae
Pathway
eaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111703682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111703682
Enzymes [BR:
eaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
111703682
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111703682
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111703682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_NXF1-5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
111703682
NCBI-ProteinID:
XP_023331484
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MFDKMLLRRDMEKLERNRSHHILSPEEVASGRNTSWPELEITGTIKNLSPSLWQLHHLTA
LYLNDNSLFRIPSSIALLHNLKRLDLSNNKLRSLPAEIGDLCNLRELMLSNNYLRALPYE
LGKLFQLQTMGLKGNPLGSDILSLFSEVNGTRKLLDFMLDNLGVSTTPPPPRPWMQLAPL
DRTSPTALFTVMCYNVLCDRYATRGLYGWCPQWSLNWEYRKKMILDEIKHFSADIIALQE
VETEQFYKFFLPELKREGYEGIFSPKSRAKTMAESDRKHVDGCAIFYRTAKFVLIKEQLV
EFNQMAIEHANGHEDMLNRVMTKDNIALAALLQTKEACWETGVPPDPSQVAQPILVCSAH
IHWDPEFCDVKLIQTMMLMEQLRQIVESSGHNLRLVESSGHXDIGYKECLLKMLSHTNND
QQFTHAFQMSSAYSEELMPYTNFTFDFKGIIDYIFFPKGPMRPLGILGPISEDWIKESKI
VGCPHPHIPSDHFPLLVEFGLSLGAVRSPQVMLPPPSSKVFMRGKDF
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataaaatgttattacgtcgcgacatggagaaattagaaagaaatcgatcccat
cacattctatcacctgaagaggttgcctctggtagaaacacaagttggccagaattggag
atcacaggaacaataaagaacttgtccccctcgctgtggcaactacatcacctgaccgct
ctatacctcaatgataactcactgttcagaataccttcatctatcgccctactgcacaat
ctcaaacgtcttgatctctcaaacaacaagctcagatcccttcctgcggagattggcgat
ctttgcaatctcagagaactaatgcttagtaacaactatctccgagcgcttccatacgaa
ttgggaaagctgttccagttacagacgatgggactgaaaggaaatccgctaggctcagat
attctctctctcttctctgaggtgaacggaacaagaaagctgcttgatttcatgttggac
aatctaggggtgtccaccaccccccctcctcctagaccctggatgcagttggcgcccctt
gacaggacgagtcctactgctttgtttactgttatgtgctataatgttctttgtgacaga
tatgccacaaggggtttgtacggttggtgcccccagtggtccttaaactgggaatacaga
aagaaaatgatccttgacgaaataaaacatttctcagccgacattattgcacttcaggag
gtggaaacagaacagttttataaatttttcctgccagagctaaaaagagaaggttatgaa
ggtatcttctctccaaaatcccgagcgaaaacgatggcagaatctgaccgaaaacatgtg
gatggttgtgcaatcttttacagaacagcaaagtttgtgctgattaaagaacaattagtg
gagttcaatcaaatggcaatagaacacgccaacggacatgaagacatgcttaacagggtt
atgacgaaagataacattgcacttgcagctttacttcagacaaaggaagcatgttgggag
acgggggtacccccagatccttcacaggttgcgcagcctattcttgtctgttctgcgcat
attcactgggatccagagttctgcgatgttaagctcatccaaacaatgatgttaatggag
caattgaggcagatagtggagtctagtggacataatctcaggttagtggagtctagtgga
cattaggatattggatataaagaatgtctattgaaaatgttgagccacacgaataacgat
cagcagtttacacacgctttccagatgagttcagcgtattcggaagaacttatgccctac
accaacttcacatttgacttcaaaggaattattgactatattttctttccaaaaggacca
atgcgacctctaggtattctgggacctatatctgaggactggattaaggagagtaagatt
gtaggatgcccgcaccctcatataccctcggaccatttccctcttcttgtagagttcgga
ctcagtcttggagcagtgcgaagtcctcaggttatgttgccccctccctcatccaaagtg
ttcatgaggggaaaggatttctag
DBGET
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