KEGG   Eurytemora affinis: 111704336
Entry
111704336         CDS       T07296                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
eaf  Eurytemora affinis
Pathway
eaf03020  RNA polymerase
eaf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:eaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111704336
  09124 Replication and repair
   03420 Nucleotide excision repair
    111704336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eaf03021]
    111704336
   03400 DNA repair and recombination proteins [BR:eaf03400]
    111704336
Transcription machinery [BR:eaf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     111704336
DNA repair and recombination proteins [BR:eaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111704336
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 hNIFK_binding
Other DBs
NCBI-GeneID: 111704336
NCBI-ProteinID: XP_023332329
LinkDB
Position
Unknown
AA seq 138 aa
MATYHEVPQEEDAAELTFPKEFENAETLLISEVHMLLEHRKSQNEQVEDEQKLSEVFMKT
LGYTGRFSKFRNRETIASIRALLMQKKLHKFELAALANLCPESAEEARSLVPSLEGRFSE
EELGGLLEDIQTKRSFQY
NT seq 417 nt   +upstreamnt  +downstreamnt
atggcgacctaccacgaggtgccacaggaggaagatgccgcggaactaacttttcccaaa
gaatttgaaaacgcagaaaccctcctcatatcagaggttcacatgttgcttgagcaccgg
aagtcccagaacgaacaagtcgaggacgagcagaaactgagcgaagtgttcatgaagaca
ctgggatacaccggcagattttccaagtttcgaaaccgagaaaccatcgctagtatacga
gccctactcatgcagaagaaattgcataagtttgaacttgctgcactcgcaaacctttgc
ccagaatccgcagaagaggctcgaagcctggttcccagtctggaaggacggttttccgag
gaggagctcggaggtctcttggaggatattcaaactaaacgttccttccagtattaa

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