Eurytemora carolleeae: 111704870
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Entry
111704870 CDS
T07296
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
eaf
Eurytemora carolleeae
Pathway
eaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111704870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111704870
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111704870
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111704870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
TRAM
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
111704870
NCBI-ProteinID:
XP_023333012
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MRTLVVPGLRLCESDDKHISGPGTYLMHGYIYSSHVGELTLIHTQNNTVSVEVEGCGQKT
IVPSTGDIVTVKILSVNPRFAKAHIMCVKDVVLSEPFRGQIRKEDVRSVEKDRVEMYKSF
RPGDIVLARVISFGDAGAGYLLTTGENELGVVIARSEIGASMVPVSWTEMQCPDTYIKEY
RKVAKVIPDHLATAP
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgcggactcttgtagttcctggacttagactttgtgaaagtgatgataaacatatctcc
ggcccagggacatatcttatgcatggttacatttactccagccatgtcggagaactcaca
cttatccatacacagaacaatacagtcagtgttgaggttgaagggtgtggacagaagacg
atagttccgtctaccggagatattgtaactgttaaaatactctccgttaatcctaggttt
gccaaggcgcatataatgtgcgtaaaggatgttgtcctctcagaacctttccgaggacag
atcaggaaggaggacgttagatctgtggagaaggacagggtagagatgtataaatccttc
agacccggagatattgttctggcgcgggtcatctccttcggagatgccggggccggttat
cttctgactacaggggagaacgaattgggagttgttatcgctagatcagagatcggagct
tctatggttccagtttcctggacggagatgcagtgtcctgatacttatattaaagagtac
aggaaagttgctaaagtcattcctgatcatttggcaactgctccatga
DBGET
integrated database retrieval system