KEGG   Eurytemora carolleeae: 111704870
Entry
111704870         CDS       T07296                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
eaf  Eurytemora carolleeae
Pathway
eaf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111704870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eaf03019]
    111704870
Messenger RNA biogenesis [BR:eaf03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     111704870
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     111704870
SSDB
Motif
Pfam: EXOSC1 ECR1_N S1_RRP4 TRAM ECR1_N_2
Other DBs
NCBI-GeneID: 111704870
NCBI-ProteinID: XP_023333012
LinkDB
Position
Unknown
AA seq 195 aa
MRTLVVPGLRLCESDDKHISGPGTYLMHGYIYSSHVGELTLIHTQNNTVSVEVEGCGQKT
IVPSTGDIVTVKILSVNPRFAKAHIMCVKDVVLSEPFRGQIRKEDVRSVEKDRVEMYKSF
RPGDIVLARVISFGDAGAGYLLTTGENELGVVIARSEIGASMVPVSWTEMQCPDTYIKEY
RKVAKVIPDHLATAP
NT seq 588 nt   +upstreamnt  +downstreamnt
atgcggactcttgtagttcctggacttagactttgtgaaagtgatgataaacatatctcc
ggcccagggacatatcttatgcatggttacatttactccagccatgtcggagaactcaca
cttatccatacacagaacaatacagtcagtgttgaggttgaagggtgtggacagaagacg
atagttccgtctaccggagatattgtaactgttaaaatactctccgttaatcctaggttt
gccaaggcgcatataatgtgcgtaaaggatgttgtcctctcagaacctttccgaggacag
atcaggaaggaggacgttagatctgtggagaaggacagggtagagatgtataaatccttc
agacccggagatattgttctggcgcgggtcatctccttcggagatgccggggccggttat
cttctgactacaggggagaacgaattgggagttgttatcgctagatcagagatcggagct
tctatggttccagtttcctggacggagatgcagtgtcctgatacttatattaaagagtac
aggaaagttgctaaagtcattcctgatcatttggcaactgctccatga

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