KEGG   Eurytemora carolleeae: 111705008
Entry
111705008         CDS       T07296                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
eaf  Eurytemora carolleeae
Pathway
eaf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:eaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    111705008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eaf03021]
    111705008
   03036 Chromosome and associated proteins [BR:eaf03036]
    111705008
Transcription machinery [BR:eaf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     111705008
   Coactivators
    SAGA/TFTC/STAGA complex
     111705008
Chromosome and associated proteins [BR:eaf03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     111705008
    STAGA complex
     111705008
    TFTC complex
     111705008
    SAGA complex
     111705008
    SLIK complex
     111705008
SSDB
Motif
Pfam: WD40_Prp19 WD40 TFIID_NTD2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 WD40_MABP1-WDR62_1st Beta-prop_EML NBCH_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_SPT8 WD40_RFWD3 WD_LRWD1 Beta-prop_EIPR1 LisH_PAC1
Other DBs
NCBI-GeneID: 111705008
NCBI-ProteinID: XP_023333205
LinkDB
Position
Unknown
AA seq 770 aa
MNEDGSPNFNQFQRDPGAPIHSGGDGSQQGFNNPENSMPDTRSMMDHHSSIVPNHTHPPQ
SALIPTSDQNHVQEQVPRVDHLPRVDHGPRMDQMTKVEHGRPDPVARVDQEIKSEPQSPL
PSDPAMQAILAYFRKHNLTETENKLKDELKKREAAAPIVAQASDPEVGNVLAAYRSDGDP
SSYESAYSDLEKFVENSLDMYRHELALILYPVFVHMYLELVYNQHEGEAKRFVEKFGSIQ
ECYYQEDIKKLSFVTKREHMKGNELMDNFNTSQFTVRMSRDTYTQLRQQKKHLSEKQHTL
LWNVIQEHLYLDVYEGLPRSKSQIDSTAGAMTGEANRQANRAKVYYGLLREPDVMPLPQE
EEEEPEMDGDKPKKKKKKENIIQKKSKSDPNAPIATRMPFPELRDSDKIEKARALRESMK
RANLGPDNIPSICMYTLMNVSARVTAVGVSEDSSMLAAGLSDSKIRVWSLLNHKLRKLKP
AEALKDINREAEDVLHRMLDDSTAESSKELIGHSGPVLGVSFSPDKTLLLSGSEDGVVRL
WSLQTWTCLVCYKGHIFPVWDVQFSPLGYYFASCGHDRTARLWTTEQAHPLRIFQGHFSD
VDCLAFHPNSNYIGTGSSDRSLRMWDCVTGSCVRFMTGHKSAVLCLAFSPDGRFLASGSS
DLRVLIWDCAFGHLLAELGHHTQLISGLAFSREGTILSSSAIDSTIALWDFAKLMNESSL
EEVNVTHNPDVRRDTENLLLGSYRTKSTPVLHLHYTRRNLLLAVGPLDAS
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgaatgaagatggttcaccaaactttaatcagtttcaacgtgaccctggtgctccaatc
catagtggtggggacggatctcaacagggattcaataatccagagaactcaatgccggat
acaagatcaatgatggatcatcattcaagtattgttccgaatcatactcatcctcctcag
tctgctcttattccaacctctgatcagaaccacgtgcaggagcaggtacctagagtagat
catctacccagggttgatcatggaccaagaatggatcagatgacaaaagtggaacacgga
cggcctgatcccgttgcaagggtggaccaggagatcaaatccgaaccgcaaagtcctctt
ccttcagatcctgccatgcaagccattttggcatacttccgtaaacacaacttgacggag
acggagaacaagctgaaggatgagttgaagaagagagaagctgctgctcctatagtagct
caggcctctgatcctgaggttggaaatgtactggcagcgtacaggagtgacggggatcca
tctagttacgaatctgcgtacagtgatctggagaagtttgtggagaactctttagatatg
tatagacacgagctagcactgatcctctaccctgtgttcgtccacatgtacctggagctc
gtctacaaccagcacgagggcgaggccaagaggttcgtggagaagtttggttccatccag
gagtgttactatcaggaggacattaagaagctctccttcgtaaccaagcgtgagcacatg
aaggggaacgaattaatggataacttcaatacgagtcagtttacggttagaatgtcacgt
gatacatatacccagctcagacaacagaagaaacatctttctgagaagcagcacacactt
ctctggaatgttatccaggagcatctttacctagacgtgtacgagggtttacccaggagc
aagagtcagattgattctactgccggagcaatgaccggagaagcaaaccgtcaggcaaac
cgtgccaaggtctactatggcctactccgagaaccggatgtaatgcctttgccgcaggag
gaggaagaggaaccagagatggacggagacaaacctaaaaagaagaaaaagaaggaaaat
ataattcagaagaaatccaaatcagatcccaatgcccccatagcgactagaatgcccttt
ccagagttgcgcgattcagataaaattgagaaagcgcgcgcgctacgtgaaagtatgaag
cgcgcaaacttaggtccggacaatattccatctatctgcatgtacactctgatgaatgtt
tcagcaagggttacagctgtaggagtatctgaggacagtagtatgctggcagcaggatta
tcagattccaagattagagtttggtctctcctcaaccataaactgaggaaactcaaacct
gcagaggctctgaaggatataaacagagaggctgaggatgttctgcacaggatgttggac
gactctacagcggagtctagcaaagagctgattgggcacagtggacccgtcctaggggtt
tctttcagtccggataaaacccttctcctctcaggtagcgaggacggagttgtcagactc
tggagtttacagacctggacctgtctcgtttgctacaaaggtcatatttttccggtctgg
gatgttcagttttctcctctcggatattattttgcgtcctgtggtcatgaccgaactgcc
cgactttggacgacggagcaggcacatccacttcggatatttcaaggacatttctccgat
gtcgattgtctagcttttcatcctaattcaaactatatcggaaccggttcaagtgaccgc
agtctacggatgtgggactgtgtgaccggtagttgtgtcaggtttatgaccggacataag
tccgcagttctctgcctggccttttcaccagatggtaggtttctcgcctctggttcaagt
gatctccgggttctaatctgggactgtgctttcggtcatcttctagctgagctgggtcat
catactcagcttatctcagggttagcattttccagagaaggaacaattctctccagctca
gcaatagattcaacgattgcattgtgggattttgccaagttgatgaatgagagttctctt
gaagaagtaaatgttactcacaaccctgatgtgagacgagacactgaaaacctattacta
ggaagttatagaaccaagagtactccagtcttgcatttacactacaccagacgaaacctt
ctcctagctgttggaccactagatgcgtcctaa

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