Eurytemora carolleeae: 111706042
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Entry
111706042 CDS
T07296
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
eaf
Eurytemora carolleeae
Pathway
eaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111706042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eaf03009
]
111706042
Ribosome biogenesis [BR:
eaf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111706042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML
WD40
WDR55
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
111706042
NCBI-ProteinID:
XP_023334563
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MAPFKTHSVRFYELEPLAIQCMSLNEKHDTLALSRSDSSVEVWSVSYTPYLQKTIHGTPE
GSVESLCWVDNRLFSCGLHGFLLEYDLNKLKVKAEHTVTSGPAWCLKSNMKCRKIAVGTE
EGFVCLFSVLSDTLQYDRILDKQEGRILCLSWNPEGTHLVTGSIDTIRVWDANTGHPTAR
MTTGRVERNKETIVWAVVVTSDMTVISGDSRGRTSFWNGRNGTLIDSIQSHKADVLTIEL
NPAGNVAYSSGVDPTIMHFQTISKPDGRRVWVKSLHRVVNSHDVRALVSQKDKRIISGGM
DSYLTISNYVTKSVSRVAATPRGGISEVAADAGILMLKYRNYLELWRLGETVQGSGAVGS
NLPLSREPVKLIQIKSKDDPIICSTISRDARWLAYCTLNTIRVFKLEGCKYSEEQDPDEP
PTISRLKIREDIDHPHHLVFYQNKDGDNCLLVATENGSLKAYTIISAGLYSC
NT seq
1418 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtttaagacgcacagtgtgcgattctatgagttagaacctttagctattcag
tgcatgtcgcttaatgagaagcatgatacgttagcgctctctagaagtgactccagtgtt
gaagtatggagtgtttcatatactccatatctacagaaaactatacatggtactccagag
ggaagtgttgagagtttatgttgggttgataaccggttattctcctgtggacttcatgga
ttcctactagaatatgatctaaacaaacttaaagtcaaggccgagcacactgtaacgtca
ggtccagcctggtgtcttaaatctaacatgaaatgtcgaaagattgctgtgggtacagaa
gaaggttttgtttgtttatttagtgtactgtccgatacgcttcaatatgataggatactg
gataaacaggaaggacgtatcctgtgtctctcctggaacccggaaggaacccaccttgta
accggaagtattgatactatcagagtatgggacgcaaacacagggcatccaactgctaga
atgacgacgggacgagtggaacgcaataaagagacgattgtctgggccgttgtcgtcaca
agcgatatgaccgttatttcaggggatagcagaggcagaacttcattctggaacggaaga
aatggaactttaatcgacagtattcaaagtcataaggctgatgtgttgacaatagaattg
aaccctgctggtaatgttgcatattcatctggagtagatcctaccattatgcattttcaa
acaataagtaaacctgatggacgacgtgtgtgggtgaagtcccttcaccgtgttgtcaac
agtcatgatgtccgggctcttgtatcacagaaggataaaaggattataagcggaggtatg
gattcctatctaactatctcaaactacgtcactaaatctgtttcaagagttgctgcaaca
cctcgtggaggaattagtgaggttgctgctgatgctgggattctaatgctcaaatacagg
aattatcttgaactctggagattaggggaaactgttcaagggtcaggggctgttggttcc
aacctacctctctctagagaacctgttaaactaatccagataaaaagtaaagacgatccg
ataatttgcagtacaatttcaagagatgcacgctggttggcatactgtacacttaataca
ataagagtgtttaagctggaaggatgtaagtacagtgaagaacaggaccctgatgaaccc
ccaactatctccagacttaagatcagggaagatattgatcatcctcatcatctagtattc
taccagaacaaagacggagacaattgtttgttggtcgctactgagaatggaagtctaaag
gcgtacaccatcatctctgcaggactttatagctgttg
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