Eurytemora affinis: 111706836
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Entry
111706836 CDS
T07296
Name
(RefSeq) mutS protein homolog 4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
eaf
Eurytemora affinis
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eaf03036
]
111706836
Chromosome and associated proteins [BR:
eaf03036
]
Eukaryotic type
Meiosis-specific proteins
Others
111706836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
AAA_14
ATPase_2
AAA_22
TK
Motif
Other DBs
NCBI-GeneID:
111706836
NCBI-ProteinID:
XP_023335538
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MKRLLASTPIDAETWRTRNQEVDKENERTDKYKGILTPGLTPVPHAYPDTRGSTPEISTP
APVNKLLAYLSEENSLGYPQPPGIGALAASTPAYLGKNPPTFAPSVVGENINQGAEFRGH
NPFRFGFTEQTERSLRKMKIPGDTNSGVGLGSIRESTPGFIFGHQVEKTNGHGFVDLGGE
TPGYSFRTGETNSFFGFGAIGEKTPREGINKTVDTPGVEIEDKSTDWGNFFDRSKHRFGN
DNVSFGPFDFAGTGGTGENSLSFQINLPDKPPVTNFNLFNSEERLNEEEEREKRNIYFPI
GDESRNLYLEEGSERAETSFKLPCPEPRPNFSPPKPVFMHQTKGCSNRSSMASNLYGRGM
DLSLDETLQTGPARPGRVDSDLEQGSTSALHKDTVEKLNEFSARLRALKSPGVKRAPGFG
LRPTPRGTSTPKSAGTRTPRTPKSVASTPCHNLTLVPEPDLIAAIMEGRGTAKGEVGIAA
IQISNPVLFLCQFSDSPTYPRTLSKLLSFNPAEIICPGNTNLYAQGDQRNKLNEEILIHL
PNSNLVPVQRKHFNESKGATLLQQLVTTENQGTQLQYQNKFYSLAAACALLKYLEYTENI
QFQSKSLRVEYQTAEKCTTIDPETAEQIELMSSLGDKKSKLSLFGLLNKCLTRGGIRLLR
SNLYQPPIHPQMIGERLEAVEELVENPELYTALRNSLSRFQDLELILSLCVRQSKPNVST
HILDQKMDRIIGLKQVLEFLVPLSEILAPSTSTLLKGARDLVVKHGKNCQLLLQMLHLVI
NESATSSKNATSMRFARAMAIRPNTNGLLDLDRAAFCENVDDLERHTKSLEEEYQLPVRL
VWSGTRGFYINIPQEKGRTLRIEELPDIFHRVQKNKNSITCVTEFMLMKDRLIQGNIQEI
TLISDTILEELLAEVREYIWFLYQLSETVSLIDLLLSLAAVSMNQDFTKPEFGDSIAVKG
ARHPFLEMMDVEVVPNDILADPDHRIIVLTGPNMSGKSTYLRQVILISIMAQVGCFVPAQ
SAVLRIPDRIFSRVSNRDSIETNSSTFMMEMREISFLLQHRTDRSLIIIDELGRGTGVDE
GSAVCWAVCEELLKGGSYTFLATHFQLIPLLANIYPAVVNYHFLLDRDQEQEVHFTHVLV
KGRNSVEINENYGIHLASFTSLPPSVVNSARGFLSRISNTEHRVPSLDRFDESCLNLLRS
VKGLVRMGIRDEDLVQNLRMLREQFLQESPN
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacttctagcctctactcctatcgacgcggaaacttggagaactagaaatcaa
gaagttgacaaagaaaatgaaagaacggataaatacaagggtattcttactcccggtctt
actcctgtacctcatgcctacccggatacccgtggttcaacccctgaaatttctactcct
gctccagtcaacaaattgctagcgtacttatcagaagaaaactcgctaggataccctcag
ccacccggaataggagctctagcggcgtcaaccccagcatatttaggcaaaaatcctcct
acttttgctccgagtgtagttggagaaaatataaaccaaggcgcggagttcaggggacat
aacccattcaggttcggttttacggaacagactgaaagatcgttgagaaaaatgaaaatt
ccaggagatactaattccggagttgggttaggttctattagagaaagcactccagggttt
atctttggacatcaagtagaaaagactaacgggcatgggtttgtagatctaggtggagag
actccagggtatagttttcgtactggagagacaaattctttcttcgggtttggtgctatt
ggagaaaaaactccaagagaaggtattaataaaacagtagatactcccggagtggagatt
gaagacaagagtacagattggggaaacttcttcgataggtccaagcacagatttggaaat
gacaacgtttcatttgggccatttgattttgcaggtactggtggaactggtgagaactca
ctgagtttccaaattaatttaccagacaaacctcctgtcaccaacttcaatctattcaac
agtgaagaaagattgaacgaagaggaagaaagagagaagagaaatatatattttccaatt
ggggatgagtctaggaatctgtacctagaagagggatctgagagagctgagacttcgttt
aaacttccttgtccggaacctcgtcccaacttctctcctccgaaaccagtttttatgcac
cagactaaggggtgttccaatcgaagttcaatggccagcaatttgtatgggcgaggtatg
gatctttctttagatgaaactctacagacgggaccagctagaccaggacgagtagactcg
gacttggagcagggaagcacgagcgcgttgcacaaggatactgttgaaaagctgaacgag
ttctctgctcggttgcgtgcgttaaaatctccgggtgttaaaagagctccaggtttcgga
ttgcgacctaccccaagaggaacctctactcctaagagcgctggaacccgaaccccccga
actcctaaatctgttgcgtctactccgtgtcataatttaaccctggtcccagaaccagac
ttgatcgccgccattatggaaggtcgtgggacagccaagggagaggttgggattgctgca
atacagatctctaaccctgttctctttctttgccagttctctgatagtccaacctatcct
agaaccctgagtaaactactgagcttcaaccctgcggagattatctgtcctgggaacacg
aacctttatgctcaaggagatcagagaaacaagctgaatgaagagatcttgatccatctc
ccgaattccaaccttgttcctgtacagaggaaacattttaacgagagtaagggtgcgacc
ctgctccagcagcttgtaaccactgagaaccagggaacccagctgcagtatcagaacaag
ttctattcactcgccgcagcttgtgctcttcttaaatacctagagtatacagaaaatatc
cagtttcaaagtaaatctctccgagttgaataccagacagcggagaagtgcacaactata
gaccctgagactgcggagcagattgaactcatgtcaagtcttggagataaaaaatctaag
ctttctctttttggacttctcaacaaatgcttgactagaggggggatcaggctactgaga
tccaacctttatcaacctccaatacatccgcagatgattggtgaaaggttggaagcagtt
gaggagttggtagagaatccagagttatatacagcactcagaaactctctctccaggttt
caagatctagaactgattctgtctctatgtgtccgtcagagtaaacccaacgtttccaca
cacatcctagaccagaagatggatcgaataatcggactaaaacaggttttagagtttcta
gttcctctatctgaaatcctagctccctctacctccaccctcctgaagggggccagggac
ctcgtcgttaaacacgggaagaactgtcagcttctcctccagatgcttcatctcgttatc
aacgagtcagcgacctcgtcgaagaatgcgacctcgatgaggttcgcgagggcgatggca
atccgtccaaacacgaacggattgctggatctggacagagcagctttctgtgagaacgtc
gatgatttagagagacataccaagagtctagaggaggagtaccagctgccggttagattg
gtctggtcaggaacgcgtggcttttatatcaatataccccaggagaaaggaagaacatta
aggattgaagaacttccagatattttccacagagttcagaagaacaagaactccatcact
tgtgtcacagagtttatgctgatgaaggatcgtttaattcaaggaaatattcaggaaata
accctgatatctgacactatcctagaggaacttctagctgaggttagagaatatatatgg
tttctctaccagctgagtgaaactgtttctcttattgaccttcttctttctctagccgca
gtgtcaatgaaccaggattttactaagccggagtttggggacagtattgcagtgaaggga
gctcggcatcccttcctggagatgatggatgtagaagttgtccctaatgatatactcgct
gatcctgatcacaggataattgttctaacaggacctaatatgagtggtaagtcgacctac
ctgagacaagttatactgatcagtatcatggcccaggtggggtgcttcgtgcccgctcaa
tcagctgttcttagaattccagatcgtatattttctcgtgtatccaaccgtgacagtatc
gagactaactcctccaccttcatgatggagatgagggagatctccttccttctccagcac
aggacagacagatcgttgattataattgacgagctgggccgaggaactggagtagatgaa
ggttcagcagtctgctgggcagtatgtgaggagttactcaagggtggatcctacaccttc
ctagcaacccacttccagcttatacctcttctagcaaacatatatccagctgtagttaac
tatcatttcctgcttgacagggaccaggagcaggaggttcattttactcatgtactagtg
aagggacggaatagtgttgagataaatgagaactatgggatacatcttgcttcttttacc
tccctccctccctctgtagtgaattcagccagagggtttttatccaggatatctaacaca
gaacacagagttccttctttagacaggtttgatgaaagttgtttgaacttattgagatct
gttaaaggattggtcaggatgggtatcagagacgaagatctagttcagaatctcaggatg
ttgagagaacagtttctacaggaatctccgaactag
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