Eurytemora affinis: 111707399
Help
Entry
111707399 CDS
T07296
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
eaf
Eurytemora affinis
Pathway
eaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111707399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111707399
03036 Chromosome and associated proteins [BR:
eaf03036
]
111707399
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111707399
Chromosome and associated proteins [BR:
eaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111707399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
DUF4363
Motif
Other DBs
NCBI-GeneID:
111707399
NCBI-ProteinID:
XP_023336271
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MFGQSAFGANTGGGFGANTSFGAAPNTSMFGGTPSTFGAAQQNKPAFGAGGSAFGNTGGG
LFGSSSVPAAGTGGGLFGSGGTTATSTFGSTTGAFGQPSNAFGGTAGGFGQPAQQSGGLF
GSTATTQAGGLFSGQPSTTFGATGSSFGGGSTFGFGSTNTNSNQQPGTAHVKFAPMQGSD
TMMKSGVQTSIATRHQCITCMKEYENKSMEELRCEDYMAGRKGTAGGGAAAGGLFGSTQP
AAGGGLFGSQPASSSGGLFGQQQKPLFGTSGFGGTGTAAAAPAFGSGGFGQQTTQAGGLF
GAKPFGATTTSTTGFGGFGAQQPAQSGGLFGAQSKPFGSVAPQPAGGLFGAAPTTGFGAS
TGTSFTGFGQPAQPAAQPSIGLFGAQNQAKPAFGGFGATPASSTPAFGGFGATSTSQSGG
LFGSTAAKPGFGGFGAATTSQPSTGFGGFGAASTGGGGLFGSNQAKPAFSFGGTSTAGAS
TGFGGFGSSTATGGGLFSGAAKPGGLFGAPTTGFGTGTTGFGAGTTGFGTSTGTSAFGSG
GLNFGGQTAINQAPAPQPQSSAVQQQLLMALATSPFGENPLFKPVAETGKAAELLKPGGL
TAPAAQKLLAAGQYKVSPHRNIKVRTKAVDSTKSSMFDGLEDDLSTTGEMFSPRSSVKKL
ILRPKRTDNVNNSVLSSLGDDPSLEKSLTVPLDETRPKKTEIPTRSDPDLSIQVDDSFAA
LNTRKKLVQQMDEEVMDKSGLNTSQNSAESDKDEEVCSHPGGITLRRSGYYTIPPLAEIR
PDKDGNCLVEGFTIGREGYGNIHYPGVTNIAGLNLDEIVFFRHKEVIVYPDDQNKPNLGD
GLNKKAQITLDKVWPTDKADSSIIKSSERLRAMNYEDKLVRASTRLGARFIEYRPETGSW
VFRVDHFSKYGLDESDEEDGVGVQGVQGVPGVDNKKKMKTLHLEKRTISLDVKTDSSRIK
LNTEVLDNQRAVEITESDGVSSDQEQDVEMNEVDGNINARRTLLRSALFSECLEDGEALD
IPTPKPIILQQRNPTSNLSQARPRLIEEIATSVLMPNKGLGGSFLGETSLNVSLLRSNYS
TQSQSINLNRSSQLENSQLKNTMNRLPSYTLTGGYEKFPQLASAQIAQQQPAVITPQYTD
TDLPLSNSYLSQRFQQIADSGLFHNKRFRVGFLGGLDHVENPGSGYLNLVSVEQSQLKPW
QLTSLESWLQVCLENSECCVDDNGPFYSPSESINNLYTHHQEATRQLEECNDDESRKQLE
ETRHTWNLIHALWGQLCDLEDSMMDLDQATGRLEGHVETIERRNRFSAWLEAGVEEASRR
DKVSAREKKNYLGRVRALLTGGRVEDACDALQSKGDHRSALLVAQMGGGGVSSKLVQQQI
DRWVEVKADRYIAAERIELMSLVAGQPIQLGTMETLNTCSNLDWQRSMAVHLWYLTHPVS
SISDTLEVYEAAWRGTQPYSSRPEPAYSEEPQGNIDGEDGGKALDLKYHLIKLYSDRSHK
LESVLAPTTHTANQLDFSSSWFIYRVLCSLGYRSSGSLTNDRLCSEFSSQLEYLGYWDWA
IFVLLHIKDPVLRKSSVDAILERNVKLEDGGREEWLMDTLGVPVTWVARARAVLARTQGK
HTQLTEQLIKAKDWNEAHKLIIAEIAPSALLSQNYSQLEDFLTSLQDAADAQKINGWASE
GKVYLDFIRADTAVNKLRQTRDIENLGYELERLKPVVTGLCRTIANLPVNNSKQRLSQSE
IAKKVAHFMRAVYSFESSRGDGAASTARQLAESLSMLPLPEDYALQELRTLTRSYLAEIM
DQ
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggcagagcgcctttggagccaacacgggaggagggtttggagctaatacaagt
tttggagccgccccaaataccagtatgtttggaggtaccccgagcacttttggagctgcg
cagcagaataaaccggcgtttggagctggagggtcagcttttggcaacacaggaggagga
ctgtttggatcgagcagtgtccctgctgcgggtacaggaggaggactatttggttcagga
ggaactaccgccacatccacattcggtagtactacgggggctttcggtcaaccgagcaat
gcattcggaggaactgctggtgggtttggtcagcctgctcaacagtcgggaggattgttt
ggatctacagcaaccacccaggcaggaggtctcttctcaggacaaccatcaacaacattc
ggagctacaggatccagtttcggaggcggttccactttcggattcggaagcaccaacacc
aattcaaaccaacagccgggaaccgcccacgttaaatttgcgccgatgcaaggttctgat
acgatgatgaaatctggtgttcagacaagtatagccaccagacatcaatgtataacctgc
atgaaggagtatgaaaacaaatcaatggaagagctaagatgtgaggattatatggccggc
cgtaaaggtacagcaggaggtggggctgctgcaggcggacttttcggctctactcaaccg
gcagccggcggtggactattcggctctcagccagcctccagctctggtggactttttggt
caacagcagaaaccgttgtttggtacttcaggatttggtggtaccgggacggccgccgct
gcaccagctttcggcagcggtggatttggccaacagacgactcaggccggtggattgttc
ggagctaaaccatttggtgctacaactacctcaacaacaggcttcggtgggtttggtgct
caacagccggcacagtcaggcggcttgttcggtgctcagagcaaaccgttcgggtcggtt
gcccctcagcctgccggcggtttatttggtgctgctcccaccaccggtttcggggctagc
acaggtacttcctttactggttttggtcaacccgcccaaccggcggctcagccaagcatt
ggactctttggtgctcaaaaccaggctaaaccagctttcggtggatttggagcaaccccc
gcctcgagcacgccagcctttggtgggttcggagctacctccacctcccagagcggaggt
ttattcgggagcaccgccgccaaacctggattcggaggatttggagcggcaacaacttct
caacctagtacagggtttggaggatttggggctgccagcaccggcggtggtggtttgttc
ggtagcaaccaagctaaacctgccttttctttcggcggcactagtaccgccggcgccagt
actggattcggagggtttggatcaagtactgccactggtggtggtttattcagtggtgct
gctaaacccggcggattattcggtgcgccgactacagggtttggcaccggaacaacaggc
tttggagccggaacaaccggtttcggaacaagtaccggaacttcagcttttggtagcggc
gggttaaattttggcggtcagactgcgatcaaccaagctcctgcccctcagccacaaagc
tcggcggttcaacagcagctcctgatggccctagcaactagtccttttggagagaacccg
ttgtttaaaccagtcgcggagactgggaaagcagctgagctgcttaaacctggcggactt
actgccccagctgctcagaagctcctcgctgctggtcaatacaaggtctcacctcacagg
aatatcaaggttcgaactaaagctgttgattcgactaaaagctcaatgttcgacggactc
gaagatgatttatcgacaacgggagaaatgttctctccaagatccagtgttaaaaaatta
atactgagacccaagaggacggataatgtgaacaactccgtcctgtcttccctgggagat
gatccaagcctggagaaatctctaaccgtacccctggatgagacacgtcccaagaagacg
gaaatacctacacgctccgacccagacctctccatccaggtggacgacagcttcgcggcc
ctgaacaccaggaagaagttggttcagcagatggatgaggaagtgatggataaatcagga
ctaaatacctcacaaaacagtgctgaatcagataaggatgaagaggtttgttcccatcct
ggcgggataaccctacggcggagtggatattatacaattccgccgctggcggagatccgg
ccagacaaggacggaaactgcctggtcgaagggtttactattggacgggaaggatacggg
aatattcattatcctggagtcactaatatagccggtttaaatctggacgaaattgttttc
tttcgtcacaaggaggtaatcgtctaccctgacgatcaaaacaaaccaaaccttggagac
ggtctgaacaagaaggctcagataaccctagacaaagtgtggccgacggacaaggctgat
tcatcaatcatcaaatcatccgaacgactacgtgccatgaactacgaagacaagctagtt
cgtgcaagtacacgacttggagcccggttcattgaatacagaccagagaccggttcatgg
gtgttcagagttgatcatttctctaagtatgggttggatgaatcggacgaggaggatggt
gttggagtacaaggggttcaaggggtacccggagtagataacaaaaagaagatgaaaact
ttgcaccttgagaaaagaacgattagtttggacgttaaaactgattcaagcagaattaag
ttgaatacagaagtgttagacaatcagcgtgctgttgagataactgaatctgacggagta
tcctcagaccaggagcaggatgtcgagatgaacgaggttgacggaaatatcaacgcgcgg
agaaccttactcaggtctgcacttttttctgaatgtctggaggacggagaagctttggat
attccaacccctaaacctataatcctgcaacagagaaatcctacatcaaacctatcccag
gctcgtcccaggcttatagaagaaattgcaacctctgtactgatgccaaacaagggatta
ggaggaagttttcttggtgaaactagtctaaacgtgagcttactcagatccaactattca
acccaatcacagagtattaatctgaaccgtagttcacagctggagaattcacagctcaag
aatactatgaatagactacccagctacacgctgaccggtgggtatgaaaagttccctcag
ctggcaagcgctcagatcgctcagcaacaacctgctgttattactcctcaatacacagat
acagaccttccgcttagcaacagctacctcagccaacggtttcaacagattgccgattca
ggacttttccacaataaaaggttccgtgtcgggttcctgggtggtttagatcacgtagag
aaccctggtagcggatacttgaacctggtttctgtagagcaatctcaactcaaaccttgg
cagctcactagtttagagagctggttacaggtgtgtttagagaactccgagtgttgtgta
gatgataatggacctttttattctccttctgaatctatcaataatttatatacacatcat
caagaggccaccagacaactagaggaatgtaatgatgacgagagccggaaacaattagag
gaaaccaggcatacctggaatctaattcatgcactgtggggtcaactgtgtgacctagag
gatagtatgatggacctggatcaagcaaccgggagattggagggtcatgttgaaactata
gaacggcggaatagattctccgcctggcttgaggcgggtgtagaggaggcgagtagacgg
gataaagtctccgccagagagaagaaaaactacctgggccgagtacgcgctcttctaacc
ggaggccgggtggaggatgcttgtgatgctcttcagagtaaaggagatcatcgtagtgcg
cttcttgtggcgcagatgggcggaggcggagtttcaagtaaacttgttcaacagcagata
gatagatgggtggaagtgaaggcggatagatatattgcggcggagaggattgagcttatg
agtctggtcgctggtcaacctattcaactgggaactatggaaacactgaatacatgttct
aacctggactggcagagatctatggctgttcatctttggtatttaacccatcctgtctcc
agcatatctgatacccttgaggtttacgaggccgcctggagaggaactcaaccttactcc
tctagacctgaacccgcatactcagaggaaccacagggtaacattgatggagaggatgga
gggaaagctttggatctaaaatatcatctaattaaactttactcggacagatctcataag
ctagagagtgttttggcaccaaccacacatactgcaaaccagttggattttagttcctca
tggttcatttatagggtgttgtgtagcttgggataccgatcttcaggttccctgacaaac
gatcgtctgtgctccgagttttccagtcagctggagtacctgggatactgggactgggcg
atctttgtccttcttcacattaaagatccagttttgcgtaaaagtagtgtggatgctatt
cttgaacgcaatgtcaaactggaggatggaggacgggaggaatggctgatggatacccta
ggcgtaccagtaacatgggtagcacgggcacgtgcagtactggcgcgcactcagggcaaa
cacacccagctcacagaacagctaataaaggcgaaggactggaatgaggcgcataaactg
ataatagcagaaattgcaccttctgcacttctctcgcagaactattctcagctcgaggat
tttctcaccagtctgcaggacgcggcagatgcgcaaaagataaatggctgggctagtgag
ggaaaggtttatctggattttatccgagcagacacagcagttaataaacttagacaaacc
agagatatagaaaatcttgggtatgaactggagagattgaaacctgtggtaactggttta
tgtagaaccattgctaatttaccagtcaacaatagtaaacagagactttcacaatcagaa
attgctaaaaaggttgcgcattttatgcgcgcagtatactcctttgagtcgagtagagga
gatggtgcggcgtcgactgcgcgtcagcttgctgaatccctctctatgctccctctaccc
gaggactacgcgcttcaggagctgagaacacttacaagatcatacctagcagaaatcatg
gatcagtaa
DBGET
integrated database retrieval system
